Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3664 and Pf6N2E2_3665 are separated by 358 nucleotides Pf6N2E2_3665 and Pf6N2E2_3666 overlap by 1 nucleotides Pf6N2E2_3666 and Pf6N2E2_3667 overlap by 4 nucleotides
Pf6N2E2_3664 - Carbamoyltransferase in large core OS assembly cluster, at 4,265,287 to 4,267,035
_3664
Pf6N2E2_3665 - serine/threonine protein kinase, at 4,267,394 to 4,268,848
_3665
Pf6N2E2_3666 - InaA protein, at 4,268,848 to 4,269,600
_3666
Pf6N2E2_3667 - Heptose kinase WapQ, eukaryotic type, at 4,269,597 to 4,270,331
_3667
Position (kb)
4267
4268
4269 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4266.720 kb on - strand, within Pf6N2E2_3664 at 4266.785 kb on + strand, within Pf6N2E2_3664 at 4266.786 kb on - strand, within Pf6N2E2_3664 at 4266.929 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4266.975 kb on - strand at 4267.043 kb on + strand at 4267.044 kb on - strand at 4267.051 kb on + strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.052 kb on - strand at 4267.121 kb on - strand at 4267.121 kb on - strand at 4267.135 kb on + strand at 4267.135 kb on + strand at 4267.135 kb on + strand at 4267.141 kb on - strand at 4267.141 kb on - strand at 4267.153 kb on - strand at 4267.186 kb on + strand at 4267.186 kb on + strand at 4267.187 kb on - strand at 4267.193 kb on + strand at 4267.193 kb on + strand at 4267.242 kb on - strand at 4267.343 kb on + strand at 4267.344 kb on - strand at 4267.384 kb on - strand at 4267.395 kb on + strand at 4267.980 kb on - strand, within Pf6N2E2_3665 at 4269.303 kb on - strand, within Pf6N2E2_3666 at 4269.303 kb on - strand, within Pf6N2E2_3666 at 4269.414 kb on - strand, within Pf6N2E2_3666 at 4269.414 kb on - strand, within Pf6N2E2_3666 at 4269.414 kb on - strand, within Pf6N2E2_3666 at 4269.414 kb on - strand, within Pf6N2E2_3666 at 4269.435 kb on - strand, within Pf6N2E2_3666 at 4269.435 kb on - strand, within Pf6N2E2_3666 at 4269.719 kb on - strand, within Pf6N2E2_3667 at 4269.719 kb on - strand, within Pf6N2E2_3667
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,266,720 - Pf6N2E2_3664 0.82 +2.4 4,266,785 + Pf6N2E2_3664 0.86 +2.6 4,266,786 - Pf6N2E2_3664 0.86 +3.3 4,266,929 - +2.2 4,266,975 - +2.1 4,266,975 - +2.2 4,266,975 - +2.6 4,266,975 - +2.6 4,266,975 - +1.8 4,266,975 - +2.1 4,266,975 - +2.4 4,267,043 + +2.7 4,267,044 - -0.1 4,267,051 + +1.8 4,267,052 - +2.0 4,267,052 - +0.3 4,267,052 - +2.5 4,267,052 - +2.4 4,267,052 - +1.8 4,267,052 - +2.1 4,267,052 - +2.1 4,267,121 - -0.7 4,267,121 - -0.3 4,267,135 + +2.0 4,267,135 + +2.9 4,267,135 + +2.7 4,267,141 - +0.3 4,267,141 - +0.6 4,267,153 - +0.4 4,267,186 + -0.1 4,267,186 + -0.4 4,267,187 - +0.7 4,267,193 + -0.0 4,267,193 + +1.4 4,267,242 - +0.6 4,267,343 + -0.0 4,267,344 - +0.5 4,267,384 - +0.1 4,267,395 + +0.8 4,267,980 - Pf6N2E2_3665 0.40 -1.3 4,269,303 - Pf6N2E2_3666 0.60 -2.6 4,269,303 - Pf6N2E2_3666 0.60 -3.2 4,269,414 - Pf6N2E2_3666 0.75 -2.3 4,269,414 - Pf6N2E2_3666 0.75 -2.3 4,269,414 - Pf6N2E2_3666 0.75 -4.2 4,269,414 - Pf6N2E2_3666 0.75 -2.7 4,269,435 - Pf6N2E2_3666 0.78 -2.5 4,269,435 - Pf6N2E2_3666 0.78 -1.2 4,269,719 - Pf6N2E2_3667 0.17 -0.2 4,269,719 - Pf6N2E2_3667 0.17 -0.3
Or see this region's nucleotide sequence