Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_361 and Pf6N2E2_362 are separated by 11 nucleotides Pf6N2E2_362 and Pf6N2E2_363 are separated by 1 nucleotides
Pf6N2E2_361 - Peptide ABC transporter, permease protein, at 427,128 to 428,084
_361
Pf6N2E2_362 - Dipeptide transport system permease protein dppC, at 428,096 to 428,956
_362
Pf6N2E2_363 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 428,958 to 430,802
_363
Position (kb) 428
429 Strain fitness (log2 ratio) -2
-1
0
1
2 at 427.133 kb on + strand at 427.134 kb on - strand at 427.195 kb on + strand at 427.676 kb on + strand, within Pf6N2E2_361 at 427.676 kb on + strand, within Pf6N2E2_361 at 427.677 kb on - strand, within Pf6N2E2_361 at 427.677 kb on - strand, within Pf6N2E2_361 at 427.681 kb on - strand, within Pf6N2E2_361 at 427.885 kb on - strand, within Pf6N2E2_361 at 428.624 kb on + strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand, within Pf6N2E2_362 at 428.625 kb on - strand at 428.625 kb on - strand, within Pf6N2E2_362 at 428.664 kb on - strand, within Pf6N2E2_362 at 428.942 kb on - strand at 428.942 kb on - strand at 428.957 kb on + strand at 428.958 kb on - strand at 428.958 kb on - strand at 429.237 kb on + strand, within Pf6N2E2_363 at 429.237 kb on + strand, within Pf6N2E2_363 at 429.238 kb on - strand, within Pf6N2E2_363 at 429.238 kb on - strand, within Pf6N2E2_363 at 429.238 kb on - strand, within Pf6N2E2_363 at 429.585 kb on + strand, within Pf6N2E2_363 at 429.585 kb on + strand, within Pf6N2E2_363 at 429.585 kb on + strand, within Pf6N2E2_363 at 429.585 kb on + strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363 at 429.586 kb on - strand, within Pf6N2E2_363
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 427,133 + -0.9 427,134 - +0.8 427,195 + -0.8 427,676 + Pf6N2E2_361 0.57 +0.9 427,676 + Pf6N2E2_361 0.57 -0.5 427,677 - Pf6N2E2_361 0.57 -0.7 427,677 - Pf6N2E2_361 0.57 -0.2 427,681 - Pf6N2E2_361 0.58 +0.8 427,885 - Pf6N2E2_361 0.79 +0.6 428,624 + Pf6N2E2_362 0.61 -0.5 428,625 - Pf6N2E2_362 0.61 +1.8 428,625 - Pf6N2E2_362 0.61 -0.2 428,625 - Pf6N2E2_362 0.61 -0.7 428,625 - +0.8 428,625 - Pf6N2E2_362 0.61 -0.2 428,664 - Pf6N2E2_362 0.66 -1.8 428,942 - +0.7 428,942 - +0.6 428,957 + +0.8 428,958 - -0.7 428,958 - -0.1 429,237 + Pf6N2E2_363 0.15 +0.0 429,237 + Pf6N2E2_363 0.15 -0.8 429,238 - Pf6N2E2_363 0.15 +1.3 429,238 - Pf6N2E2_363 0.15 +0.2 429,238 - Pf6N2E2_363 0.15 -0.2 429,585 + Pf6N2E2_363 0.34 +0.5 429,585 + Pf6N2E2_363 0.34 +0.0 429,585 + Pf6N2E2_363 0.34 +0.8 429,585 + Pf6N2E2_363 0.34 +0.6 429,586 - Pf6N2E2_363 0.34 -0.6 429,586 - Pf6N2E2_363 0.34 +0.5 429,586 - Pf6N2E2_363 0.34 -1.0 429,586 - Pf6N2E2_363 0.34 +0.2 429,586 - Pf6N2E2_363 0.34 -0.2 429,586 - Pf6N2E2_363 0.34 +0.2
Or see this region's nucleotide sequence