Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_348 and Pf6N2E2_349 overlap by 4 nucleotides Pf6N2E2_349 and Pf6N2E2_350 are separated by 65 nucleotides Pf6N2E2_350 and Pf6N2E2_351 are separated by 5 nucleotides
Pf6N2E2_348 - Transcriptional regulator, LysR family, at 414,114 to 415,043
_348
Pf6N2E2_349 - hypothetical protein, at 415,040 to 415,774
_349
Pf6N2E2_350 - Gfa-like protein, at 415,840 to 416,232
_350
Pf6N2E2_351 - Aldehyde dehydrogenase (EC 1.2.1.3), at 416,238 to 417,686
_351
Position (kb) 415
416
417 Strain fitness (log2 ratio) -2
-1
0
1
2 at 414.849 kb on + strand, within Pf6N2E2_348 at 414.849 kb on + strand, within Pf6N2E2_348 at 414.849 kb on + strand, within Pf6N2E2_348 at 414.849 kb on + strand, within Pf6N2E2_348 at 414.849 kb on + strand, within Pf6N2E2_348 at 414.850 kb on - strand, within Pf6N2E2_348 at 414.850 kb on - strand, within Pf6N2E2_348 at 414.850 kb on - strand, within Pf6N2E2_348 at 414.850 kb on - strand, within Pf6N2E2_348 at 414.927 kb on + strand, within Pf6N2E2_348 at 414.927 kb on + strand, within Pf6N2E2_348 at 415.062 kb on + strand at 415.062 kb on + strand at 415.063 kb on - strand at 415.063 kb on - strand at 415.073 kb on + strand at 415.073 kb on + strand at 415.074 kb on - strand at 415.074 kb on - strand at 415.074 kb on - strand at 415.082 kb on + strand at 415.083 kb on - strand at 415.083 kb on - strand at 415.347 kb on + strand, within Pf6N2E2_349 at 415.515 kb on + strand, within Pf6N2E2_349 at 415.516 kb on - strand, within Pf6N2E2_349 at 415.542 kb on - strand, within Pf6N2E2_349 at 415.660 kb on + strand, within Pf6N2E2_349 at 415.660 kb on + strand, within Pf6N2E2_349 at 415.772 kb on + strand at 415.773 kb on - strand at 415.806 kb on + strand at 415.807 kb on - strand at 415.807 kb on - strand at 415.807 kb on - strand at 415.807 kb on - strand at 415.865 kb on + strand at 416.131 kb on + strand, within Pf6N2E2_350 at 416.192 kb on - strand, within Pf6N2E2_350 at 416.231 kb on - strand at 416.231 kb on - strand at 416.272 kb on + strand at 416.272 kb on + strand at 416.272 kb on + strand at 416.297 kb on - strand at 416.323 kb on + strand at 416.449 kb on + strand, within Pf6N2E2_351 at 416.584 kb on + strand, within Pf6N2E2_351 at 416.584 kb on + strand, within Pf6N2E2_351 at 416.585 kb on - strand, within Pf6N2E2_351 at 417.212 kb on - strand, within Pf6N2E2_351
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 414,849 + Pf6N2E2_348 0.79 +1.0 414,849 + Pf6N2E2_348 0.79 +2.0 414,849 + Pf6N2E2_348 0.79 -0.2 414,849 + Pf6N2E2_348 0.79 +0.9 414,849 + Pf6N2E2_348 0.79 +0.3 414,850 - Pf6N2E2_348 0.79 +1.0 414,850 - Pf6N2E2_348 0.79 -0.3 414,850 - Pf6N2E2_348 0.79 -1.6 414,850 - Pf6N2E2_348 0.79 +0.6 414,927 + Pf6N2E2_348 0.87 +0.9 414,927 + Pf6N2E2_348 0.87 -0.2 415,062 + -0.8 415,062 + +1.8 415,063 - -1.8 415,063 - -0.0 415,073 + -2.7 415,073 + -0.5 415,074 - +0.5 415,074 - +1.8 415,074 - +0.3 415,082 + -0.2 415,083 - +0.2 415,083 - +0.8 415,347 + Pf6N2E2_349 0.42 +0.3 415,515 + Pf6N2E2_349 0.65 -0.0 415,516 - Pf6N2E2_349 0.65 +0.8 415,542 - Pf6N2E2_349 0.68 -0.4 415,660 + Pf6N2E2_349 0.84 +0.2 415,660 + Pf6N2E2_349 0.84 -0.8 415,772 + +0.4 415,773 - -0.4 415,806 + -0.2 415,807 - +0.2 415,807 - -0.8 415,807 - +0.5 415,807 - +0.7 415,865 + +0.4 416,131 + Pf6N2E2_350 0.74 -1.2 416,192 - Pf6N2E2_350 0.90 -0.7 416,231 - +0.5 416,231 - +0.8 416,272 + +0.8 416,272 + -0.2 416,272 + +0.5 416,297 - -1.1 416,323 + +1.1 416,449 + Pf6N2E2_351 0.15 +0.0 416,584 + Pf6N2E2_351 0.24 +1.1 416,584 + Pf6N2E2_351 0.24 -0.3 416,585 - Pf6N2E2_351 0.24 -1.2 417,212 - Pf6N2E2_351 0.67 -0.3
Or see this region's nucleotide sequence