Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1491 and Pf6N2E2_1492 are separated by 45 nucleotides Pf6N2E2_1492 and Pf6N2E2_1493 are separated by 27 nucleotides Pf6N2E2_1493 and Pf6N2E2_1494 overlap by 14 nucleotides
Pf6N2E2_1491 - Cystathionine beta-lyase (EC 4.4.1.8), at 1,743,712 to 1,746,477
_1491
Pf6N2E2_1492 - No significant database matches, at 1,746,523 to 1,747,122
_1492
Pf6N2E2_1493 - ABC-type polar amino acid transport system, ATPase component, at 1,747,150 to 1,747,986
_1493
Pf6N2E2_1494 - Glutamate transport membrane-spanning protein, at 1,747,973 to 1,748,761
_1494
Position (kb)
1746
1747
1748 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1745.534 kb on + strand, within Pf6N2E2_1491 at 1745.534 kb on + strand, within Pf6N2E2_1491 at 1745.534 kb on + strand, within Pf6N2E2_1491 at 1745.535 kb on - strand, within Pf6N2E2_1491 at 1745.535 kb on - strand, within Pf6N2E2_1491 at 1745.840 kb on + strand, within Pf6N2E2_1491 at 1745.840 kb on + strand, within Pf6N2E2_1491 at 1745.840 kb on + strand, within Pf6N2E2_1491 at 1745.840 kb on + strand, within Pf6N2E2_1491 at 1745.841 kb on - strand, within Pf6N2E2_1491 at 1745.841 kb on - strand, within Pf6N2E2_1491 at 1745.841 kb on - strand, within Pf6N2E2_1491 at 1746.118 kb on + strand, within Pf6N2E2_1491 at 1746.119 kb on - strand, within Pf6N2E2_1491 at 1746.119 kb on - strand, within Pf6N2E2_1491 at 1746.346 kb on - strand at 1746.463 kb on + strand at 1746.464 kb on - strand at 1746.534 kb on - strand at 1746.569 kb on + strand at 1746.570 kb on - strand at 1746.636 kb on - strand, within Pf6N2E2_1492 at 1746.715 kb on - strand, within Pf6N2E2_1492 at 1746.715 kb on - strand, within Pf6N2E2_1492 at 1746.758 kb on + strand, within Pf6N2E2_1492 at 1746.792 kb on - strand, within Pf6N2E2_1492 at 1747.117 kb on - strand at 1747.191 kb on - strand at 1747.191 kb on - strand at 1747.191 kb on - strand at 1747.243 kb on + strand, within Pf6N2E2_1493 at 1747.332 kb on - strand, within Pf6N2E2_1493 at 1747.382 kb on - strand, within Pf6N2E2_1493 at 1747.694 kb on + strand, within Pf6N2E2_1493 at 1747.694 kb on + strand, within Pf6N2E2_1493 at 1747.694 kb on + strand, within Pf6N2E2_1493 at 1747.694 kb on + strand, within Pf6N2E2_1493 at 1747.695 kb on - strand, within Pf6N2E2_1493 at 1747.695 kb on - strand, within Pf6N2E2_1493 at 1747.977 kb on + strand at 1748.008 kb on + strand at 1748.009 kb on - strand at 1748.031 kb on + strand at 1748.062 kb on - strand, within Pf6N2E2_1494 at 1748.062 kb on - strand, within Pf6N2E2_1494
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 1,745,534 + Pf6N2E2_1491 0.66 +0.3 1,745,534 + Pf6N2E2_1491 0.66 -0.4 1,745,534 + Pf6N2E2_1491 0.66 +0.4 1,745,535 - Pf6N2E2_1491 0.66 +0.0 1,745,535 - Pf6N2E2_1491 0.66 -0.2 1,745,840 + Pf6N2E2_1491 0.77 +1.0 1,745,840 + Pf6N2E2_1491 0.77 -0.3 1,745,840 + Pf6N2E2_1491 0.77 +0.3 1,745,840 + Pf6N2E2_1491 0.77 +1.3 1,745,841 - Pf6N2E2_1491 0.77 +0.2 1,745,841 - Pf6N2E2_1491 0.77 +0.1 1,745,841 - Pf6N2E2_1491 0.77 +0.8 1,746,118 + Pf6N2E2_1491 0.87 +0.4 1,746,119 - Pf6N2E2_1491 0.87 +0.6 1,746,119 - Pf6N2E2_1491 0.87 +0.7 1,746,346 - -0.5 1,746,463 + -0.9 1,746,464 - +0.0 1,746,534 - +0.3 1,746,569 + -0.1 1,746,570 - -0.2 1,746,636 - Pf6N2E2_1492 0.19 +0.7 1,746,715 - Pf6N2E2_1492 0.32 -0.3 1,746,715 - Pf6N2E2_1492 0.32 +0.1 1,746,758 + Pf6N2E2_1492 0.39 -0.9 1,746,792 - Pf6N2E2_1492 0.45 -2.1 1,747,117 - -0.2 1,747,191 - -0.1 1,747,191 - -0.2 1,747,191 - -0.6 1,747,243 + Pf6N2E2_1493 0.11 -0.8 1,747,332 - Pf6N2E2_1493 0.22 +1.5 1,747,382 - Pf6N2E2_1493 0.28 -0.0 1,747,694 + Pf6N2E2_1493 0.65 -1.2 1,747,694 + Pf6N2E2_1493 0.65 +0.1 1,747,694 + Pf6N2E2_1493 0.65 +1.9 1,747,694 + Pf6N2E2_1493 0.65 +0.6 1,747,695 - Pf6N2E2_1493 0.65 -0.4 1,747,695 - Pf6N2E2_1493 0.65 -0.6 1,747,977 + +0.3 1,748,008 + -0.0 1,748,009 - +0.7 1,748,031 + +0.4 1,748,062 - Pf6N2E2_1494 0.11 +0.1 1,748,062 - Pf6N2E2_1494 0.11 -0.4
Or see this region's nucleotide sequence