Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1212 and Pf6N2E2_1213 are separated by 79 nucleotides Pf6N2E2_1213 and Pf6N2E2_1214 are separated by 9 nucleotides Pf6N2E2_1214 and Pf6N2E2_1215 are separated by 168 nucleotides
Pf6N2E2_1212 - Oxidoreductase, short chain dehydrogenase/reductase family, at 1,418,735 to 1,419,592
_1212
Pf6N2E2_1213 - hypothetical protein, at 1,419,672 to 1,419,794
_1213
Pf6N2E2_1214 - C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS, at 1,419,804 to 1,420,304
_1214
Pf6N2E2_1215 - probable membrane protein YPO2362, at 1,420,473 to 1,421,084
_1215
Position (kb)
1419
1420 Strain fitness (log2 ratio)
-1
0
1
2 at 1418.834 kb on + strand, within Pf6N2E2_1212 at 1418.834 kb on + strand, within Pf6N2E2_1212 at 1418.834 kb on + strand, within Pf6N2E2_1212 at 1419.095 kb on - strand, within Pf6N2E2_1212 at 1419.154 kb on - strand, within Pf6N2E2_1212 at 1419.175 kb on + strand, within Pf6N2E2_1212 at 1419.175 kb on + strand, within Pf6N2E2_1212 at 1419.175 kb on + strand, within Pf6N2E2_1212 at 1419.176 kb on - strand, within Pf6N2E2_1212 at 1419.305 kb on + strand, within Pf6N2E2_1212 at 1419.306 kb on - strand, within Pf6N2E2_1212 at 1419.306 kb on - strand, within Pf6N2E2_1212 at 1419.512 kb on + strand at 1419.512 kb on + strand at 1419.542 kb on + strand at 1419.542 kb on + strand at 1419.542 kb on + strand at 1419.542 kb on + strand at 1419.542 kb on + strand at 1419.543 kb on - strand at 1419.543 kb on - strand at 1419.543 kb on - strand at 1419.585 kb on + strand at 1419.586 kb on - strand at 1419.688 kb on + strand, within Pf6N2E2_1213 at 1419.688 kb on + strand, within Pf6N2E2_1213 at 1419.688 kb on + strand, within Pf6N2E2_1213 at 1419.689 kb on - strand, within Pf6N2E2_1213 at 1419.689 kb on - strand, within Pf6N2E2_1213 at 1420.157 kb on - strand, within Pf6N2E2_1214 at 1420.276 kb on + strand at 1420.277 kb on - strand at 1420.277 kb on - strand at 1420.277 kb on - strand at 1420.528 kb on + strand at 1420.528 kb on + strand at 1420.528 kb on + strand at 1420.529 kb on - strand at 1420.529 kb on - strand at 1420.529 kb on - strand at 1420.529 kb on - strand at 1420.560 kb on + strand, within Pf6N2E2_1215 at 1420.601 kb on - strand, within Pf6N2E2_1215 at 1420.702 kb on - strand, within Pf6N2E2_1215 at 1420.702 kb on - strand, within Pf6N2E2_1215
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 1,418,834 + Pf6N2E2_1212 0.12 +0.4 1,418,834 + Pf6N2E2_1212 0.12 -0.6 1,418,834 + Pf6N2E2_1212 0.12 +0.0 1,419,095 - Pf6N2E2_1212 0.42 +1.4 1,419,154 - Pf6N2E2_1212 0.49 +0.7 1,419,175 + Pf6N2E2_1212 0.51 -0.5 1,419,175 + Pf6N2E2_1212 0.51 +0.5 1,419,175 + Pf6N2E2_1212 0.51 +0.1 1,419,176 - Pf6N2E2_1212 0.51 -0.2 1,419,305 + Pf6N2E2_1212 0.66 -1.0 1,419,306 - Pf6N2E2_1212 0.67 +2.4 1,419,306 - Pf6N2E2_1212 0.67 -0.5 1,419,512 + -0.8 1,419,512 + +1.9 1,419,542 + +0.7 1,419,542 + +0.5 1,419,542 + +0.4 1,419,542 + -0.2 1,419,542 + -0.3 1,419,543 - -0.2 1,419,543 - +0.8 1,419,543 - -0.1 1,419,585 + +0.6 1,419,586 - +1.1 1,419,688 + Pf6N2E2_1213 0.13 +0.5 1,419,688 + Pf6N2E2_1213 0.13 -0.6 1,419,688 + Pf6N2E2_1213 0.13 -1.1 1,419,689 - Pf6N2E2_1213 0.14 -0.2 1,419,689 - Pf6N2E2_1213 0.14 -0.6 1,420,157 - Pf6N2E2_1214 0.70 -0.1 1,420,276 + -0.3 1,420,277 - +0.1 1,420,277 - +0.4 1,420,277 - -1.3 1,420,528 + +0.7 1,420,528 + +0.1 1,420,528 + +0.1 1,420,529 - +0.1 1,420,529 - +0.6 1,420,529 - -0.9 1,420,529 - -0.7 1,420,560 + Pf6N2E2_1215 0.14 +0.4 1,420,601 - Pf6N2E2_1215 0.21 -0.2 1,420,702 - Pf6N2E2_1215 0.37 -0.2 1,420,702 - Pf6N2E2_1215 0.37 -0.9
Or see this region's nucleotide sequence