Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_767 and Pf1N1B4_768 are separated by 83 nucleotides Pf1N1B4_768 and Pf1N1B4_769 are separated by 369 nucleotides
Pf1N1B4_767 - Glycerol kinase (EC 2.7.1.30), at 870,987 to 872,492
_767
Pf1N1B4_768 - Glycerol-3-phosphate regulon repressor, DeoR family, at 872,576 to 873,331
_768
Pf1N1B4_769 - Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 873,701 to 875,161
_769
Position (kb)
872
873
874 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.774 kb on - strand, within Pf1N1B4_767 at 871.774 kb on - strand at 871.971 kb on + strand, within Pf1N1B4_767 at 871.971 kb on + strand, within Pf1N1B4_767 at 871.972 kb on - strand, within Pf1N1B4_767 at 872.007 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.491 kb on - strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 873.329 kb on + strand at 873.398 kb on + strand at 873.398 kb on + strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.401 kb on - strand at 873.401 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.595 kb on + strand at 873.597 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.644 kb on + strand at 873.644 kb on + strand at 873.665 kb on + strand at 873.665 kb on + strand at 873.665 kb on + strand at 873.665 kb on + strand at 873.666 kb on - strand at 873.831 kb on - strand at 873.977 kb on + strand, within Pf1N1B4_769 at 874.116 kb on + strand, within Pf1N1B4_769 at 874.116 kb on + strand, within Pf1N1B4_769
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 871,773 + Pf1N1B4_767 0.52 +0.0 871,773 + Pf1N1B4_767 0.52 +1.2 871,773 + Pf1N1B4_767 0.52 -0.7 871,773 + Pf1N1B4_767 0.52 -1.3 871,774 - Pf1N1B4_767 0.52 -0.5 871,774 - +1.0 871,971 + Pf1N1B4_767 0.65 +2.6 871,971 + Pf1N1B4_767 0.65 -0.7 871,972 - Pf1N1B4_767 0.65 -1.0 872,007 + Pf1N1B4_767 0.68 +2.0 872,313 + Pf1N1B4_767 0.88 -0.5 872,313 + Pf1N1B4_767 0.88 -1.5 872,491 - +2.0 872,508 + +0.3 872,508 + +0.0 872,508 + -1.6 872,509 - +1.4 872,509 - +0.6 872,509 - +1.0 872,509 - -1.0 873,329 + -0.5 873,398 + -1.3 873,398 + +1.2 873,399 - -2.0 873,399 - -1.8 873,399 - -1.8 873,399 - -0.7 873,399 - +1.6 873,399 - +0.0 873,399 - -0.2 873,399 - +1.6 873,401 - -2.3 873,401 - -0.1 873,474 - -0.8 873,474 - +1.6 873,474 - -0.8 873,474 - -2.2 873,474 - -0.4 873,474 - -0.1 873,595 + -1.5 873,597 + -1.5 873,635 + -3.4 873,635 + -2.5 873,635 + -1.6 873,635 + -1.5 873,636 - -1.0 873,636 - -0.1 873,636 - -1.5 873,644 + -0.4 873,644 + -1.0 873,665 + -2.3 873,665 + -2.0 873,665 + -2.3 873,665 + -1.5 873,666 - -0.8 873,831 - -1.0 873,977 + Pf1N1B4_769 0.19 +0.0 874,116 + Pf1N1B4_769 0.28 -1.0 874,116 + Pf1N1B4_769 0.28 -1.0
Or see this region's nucleotide sequence