Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_760 and Pf1N1B4_761 are separated by 134 nucleotides Pf1N1B4_761 and Pf1N1B4_762 are separated by 403 nucleotides
Pf1N1B4_760 - Formate dehydrogenase-O, major subunit (EC 1.2.1.2), at 863,239 to 865,344
_760
Pf1N1B4_761 - FIG00954879: hypothetical protein, at 865,479 to 865,769
_761
Pf1N1B4_762 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 866,173 to 867,096
_762
Position (kb)
865
866 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 864.630 kb on + strand, within Pf1N1B4_760 at 864.630 kb on + strand, within Pf1N1B4_760 at 864.630 kb on + strand, within Pf1N1B4_760 at 864.631 kb on - strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.887 kb on + strand, within Pf1N1B4_760 at 864.888 kb on - strand, within Pf1N1B4_760 at 864.888 kb on - strand at 864.888 kb on - strand, within Pf1N1B4_760 at 864.888 kb on - strand, within Pf1N1B4_760 at 864.888 kb on - strand, within Pf1N1B4_760 at 864.974 kb on + strand, within Pf1N1B4_760 at 864.974 kb on + strand, within Pf1N1B4_760 at 864.975 kb on - strand, within Pf1N1B4_760 at 864.975 kb on - strand at 864.998 kb on + strand, within Pf1N1B4_760 at 864.998 kb on + strand, within Pf1N1B4_760 at 864.999 kb on - strand, within Pf1N1B4_760 at 865.026 kb on - strand, within Pf1N1B4_760 at 865.110 kb on + strand, within Pf1N1B4_760 at 865.111 kb on - strand, within Pf1N1B4_760 at 865.255 kb on + strand at 865.398 kb on - strand at 865.398 kb on - strand at 865.398 kb on - strand at 865.398 kb on - strand at 865.727 kb on + strand at 865.728 kb on - strand, within Pf1N1B4_761 at 865.738 kb on - strand, within Pf1N1B4_761 at 865.738 kb on - strand, within Pf1N1B4_761 at 865.738 kb on - strand, within Pf1N1B4_761 at 865.738 kb on - strand, within Pf1N1B4_761 at 865.747 kb on - strand at 865.801 kb on - strand at 865.801 kb on - strand at 865.801 kb on - strand at 865.801 kb on - strand at 865.801 kb on - strand at 865.801 kb on - strand at 865.804 kb on + strand at 865.804 kb on + strand at 865.805 kb on - strand at 865.805 kb on - strand at 865.805 kb on - strand at 865.805 kb on - strand at 865.941 kb on + strand at 865.941 kb on + strand at 865.941 kb on + strand at 865.942 kb on - strand at 865.951 kb on + strand at 866.052 kb on + strand at 866.098 kb on + strand at 866.128 kb on - strand at 866.143 kb on + strand at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.674 kb on + strand, within Pf1N1B4_762 at 866.675 kb on - strand, within Pf1N1B4_762 at 866.675 kb on - strand, within Pf1N1B4_762 at 866.676 kb on + strand, within Pf1N1B4_762 at 866.676 kb on + strand, within Pf1N1B4_762 at 866.676 kb on + strand, within Pf1N1B4_762 at 866.677 kb on - strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.678 kb on + strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.679 kb on - strand, within Pf1N1B4_762 at 866.714 kb on + strand, within Pf1N1B4_762
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 864,630 + Pf1N1B4_760 0.66 -0.4 864,630 + Pf1N1B4_760 0.66 -2.3 864,630 + Pf1N1B4_760 0.66 +1.0 864,631 - Pf1N1B4_760 0.66 -2.8 864,887 + Pf1N1B4_760 0.78 -1.0 864,887 + Pf1N1B4_760 0.78 -1.5 864,887 + Pf1N1B4_760 0.78 +0.0 864,887 + Pf1N1B4_760 0.78 +0.2 864,887 + Pf1N1B4_760 0.78 -1.5 864,887 + Pf1N1B4_760 0.78 -0.2 864,887 + Pf1N1B4_760 0.78 +1.4 864,887 + Pf1N1B4_760 0.78 -2.0 864,887 + Pf1N1B4_760 0.78 -1.0 864,888 - Pf1N1B4_760 0.78 -2.3 864,888 - +1.4 864,888 - Pf1N1B4_760 0.78 -0.8 864,888 - Pf1N1B4_760 0.78 -2.9 864,888 - Pf1N1B4_760 0.78 -1.4 864,974 + Pf1N1B4_760 0.82 +3.4 864,974 + Pf1N1B4_760 0.82 +0.0 864,975 - Pf1N1B4_760 0.82 +1.0 864,975 - -1.5 864,998 + Pf1N1B4_760 0.84 -0.2 864,998 + Pf1N1B4_760 0.84 -0.6 864,999 - Pf1N1B4_760 0.84 +3.5 865,026 - Pf1N1B4_760 0.85 -2.8 865,110 + Pf1N1B4_760 0.89 +0.3 865,111 - Pf1N1B4_760 0.89 +0.0 865,255 + -0.5 865,398 - -1.5 865,398 - +1.6 865,398 - +2.6 865,398 - +2.6 865,727 + +0.0 865,728 - Pf1N1B4_761 0.86 +0.0 865,738 - Pf1N1B4_761 0.89 -1.5 865,738 - Pf1N1B4_761 0.89 -0.5 865,738 - Pf1N1B4_761 0.89 -1.3 865,738 - Pf1N1B4_761 0.89 -0.6 865,747 - +1.0 865,801 - +1.0 865,801 - -0.3 865,801 - +0.5 865,801 - +0.9 865,801 - +0.0 865,801 - +1.0 865,804 + -1.0 865,804 + -0.5 865,805 - -0.7 865,805 - +0.2 865,805 - +1.0 865,805 - +0.0 865,941 + -1.5 865,941 + -0.6 865,941 + +0.0 865,942 - +1.0 865,951 + -1.1 866,052 + -2.0 866,098 + +0.9 866,128 - +1.6 866,143 + -2.5 866,674 + Pf1N1B4_762 0.54 +1.9 866,674 + Pf1N1B4_762 0.54 +0.9 866,674 + Pf1N1B4_762 0.54 +1.0 866,674 + Pf1N1B4_762 0.54 +0.5 866,674 + Pf1N1B4_762 0.54 +1.4 866,674 + Pf1N1B4_762 0.54 +4.0 866,674 + Pf1N1B4_762 0.54 +0.7 866,674 + Pf1N1B4_762 0.54 -1.3 866,675 - Pf1N1B4_762 0.54 -0.5 866,675 - Pf1N1B4_762 0.54 +1.2 866,676 + Pf1N1B4_762 0.54 -0.4 866,676 + Pf1N1B4_762 0.54 -1.8 866,676 + Pf1N1B4_762 0.54 -2.0 866,677 - Pf1N1B4_762 0.55 -0.5 866,678 + Pf1N1B4_762 0.55 +0.0 866,678 + Pf1N1B4_762 0.55 +2.4 866,678 + Pf1N1B4_762 0.55 +0.0 866,678 + Pf1N1B4_762 0.55 +0.0 866,678 + -0.5 866,678 + Pf1N1B4_762 0.55 +2.2 866,678 + Pf1N1B4_762 0.55 +1.9 866,678 + Pf1N1B4_762 0.55 +1.3 866,678 + Pf1N1B4_762 0.55 +2.2 866,678 + Pf1N1B4_762 0.55 -0.7 866,678 + Pf1N1B4_762 0.55 -1.0 866,679 - Pf1N1B4_762 0.55 -0.8 866,679 - Pf1N1B4_762 0.55 +0.7 866,679 - Pf1N1B4_762 0.55 -2.3 866,679 - Pf1N1B4_762 0.55 +0.6 866,679 - Pf1N1B4_762 0.55 +0.0 866,679 - Pf1N1B4_762 0.55 +1.0 866,679 - Pf1N1B4_762 0.55 +1.4 866,679 - Pf1N1B4_762 0.55 +1.8 866,679 - Pf1N1B4_762 0.55 -1.8 866,679 - Pf1N1B4_762 0.55 +0.8 866,679 - Pf1N1B4_762 0.55 +1.3 866,714 + Pf1N1B4_762 0.59 -2.3
Or see this region's nucleotide sequence