Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_715 and Pf1N1B4_716 are separated by 261 nucleotides Pf1N1B4_716 and Pf1N1B4_717 are separated by 27 nucleotides
Pf1N1B4_715 - Iron-regulated protein A precursor, at 814,643 to 815,986
_715
Pf1N1B4_716 - Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites, at 816,248 to 817,675
_716
Pf1N1B4_717 - Iron-regulated protein A precursor, at 817,703 to 818,767
_717
Position (kb) 816
817
818 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 815.378 kb on + strand, within Pf1N1B4_715 at 815.379 kb on - strand, within Pf1N1B4_715 at 815.431 kb on + strand, within Pf1N1B4_715 at 815.460 kb on - strand at 815.460 kb on - strand, within Pf1N1B4_715 at 815.637 kb on - strand, within Pf1N1B4_715 at 815.656 kb on + strand, within Pf1N1B4_715 at 815.663 kb on + strand, within Pf1N1B4_715 at 815.664 kb on - strand, within Pf1N1B4_715 at 815.675 kb on + strand, within Pf1N1B4_715 at 815.676 kb on - strand, within Pf1N1B4_715 at 815.831 kb on + strand, within Pf1N1B4_715 at 816.006 kb on + strand at 816.007 kb on - strand at 816.207 kb on - strand at 816.645 kb on - strand, within Pf1N1B4_716 at 816.740 kb on - strand, within Pf1N1B4_716 at 817.093 kb on + strand, within Pf1N1B4_716 at 817.229 kb on + strand, within Pf1N1B4_716 at 817.229 kb on + strand, within Pf1N1B4_716 at 817.229 kb on + strand, within Pf1N1B4_716 at 817.231 kb on + strand, within Pf1N1B4_716 at 817.398 kb on - strand, within Pf1N1B4_716 at 817.673 kb on + strand at 817.676 kb on + strand at 817.677 kb on - strand at 817.823 kb on + strand, within Pf1N1B4_717 at 817.824 kb on - strand, within Pf1N1B4_717 at 818.101 kb on - strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.129 kb on + strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.130 kb on - strand, within Pf1N1B4_717 at 818.183 kb on + strand, within Pf1N1B4_717 at 818.183 kb on + strand, within Pf1N1B4_717 at 818.183 kb on + strand, within Pf1N1B4_717 at 818.183 kb on + strand, within Pf1N1B4_717 at 818.184 kb on - strand, within Pf1N1B4_717 at 818.184 kb on - strand, within Pf1N1B4_717 at 818.184 kb on - strand, within Pf1N1B4_717 at 818.580 kb on - strand, within Pf1N1B4_717 at 818.672 kb on + strand at 818.672 kb on + strand at 818.672 kb on + strand at 818.672 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 815,378 + Pf1N1B4_715 0.55 +0.8 815,379 - Pf1N1B4_715 0.55 +0.5 815,431 + Pf1N1B4_715 0.59 +0.0 815,460 - -0.5 815,460 - Pf1N1B4_715 0.61 -1.0 815,637 - Pf1N1B4_715 0.74 +0.3 815,656 + Pf1N1B4_715 0.75 -0.4 815,663 + Pf1N1B4_715 0.76 +0.7 815,664 - Pf1N1B4_715 0.76 +0.0 815,675 + Pf1N1B4_715 0.77 -3.3 815,676 - Pf1N1B4_715 0.77 +0.3 815,831 + Pf1N1B4_715 0.88 +0.0 816,006 + +0.0 816,007 - +0.6 816,207 - +1.4 816,645 - Pf1N1B4_716 0.28 +0.7 816,740 - Pf1N1B4_716 0.34 +1.8 817,093 + Pf1N1B4_716 0.59 +1.4 817,229 + Pf1N1B4_716 0.69 +1.4 817,229 + Pf1N1B4_716 0.69 -0.4 817,229 + Pf1N1B4_716 0.69 +0.9 817,231 + Pf1N1B4_716 0.69 -0.4 817,398 - Pf1N1B4_716 0.81 -1.1 817,673 + +0.0 817,676 + -0.5 817,677 - +0.8 817,823 + Pf1N1B4_717 0.11 -0.1 817,824 - Pf1N1B4_717 0.11 +0.0 818,101 - Pf1N1B4_717 0.37 +2.2 818,129 + Pf1N1B4_717 0.40 -0.1 818,129 + Pf1N1B4_717 0.40 -2.3 818,129 + +0.0 818,129 + Pf1N1B4_717 0.40 -0.5 818,129 + Pf1N1B4_717 0.40 -0.5 818,129 + -1.0 818,129 + Pf1N1B4_717 0.40 -0.4 818,129 + Pf1N1B4_717 0.40 -0.7 818,129 + Pf1N1B4_717 0.40 +0.8 818,129 + Pf1N1B4_717 0.40 +0.5 818,130 - Pf1N1B4_717 0.40 -1.0 818,130 - Pf1N1B4_717 0.40 -1.4 818,130 - Pf1N1B4_717 0.40 +1.0 818,130 - Pf1N1B4_717 0.40 +3.7 818,130 - Pf1N1B4_717 0.40 -1.0 818,130 - Pf1N1B4_717 0.40 -0.5 818,130 - Pf1N1B4_717 0.40 +0.0 818,130 - Pf1N1B4_717 0.40 -0.4 818,183 + Pf1N1B4_717 0.45 +0.0 818,183 + Pf1N1B4_717 0.45 +0.6 818,183 + Pf1N1B4_717 0.45 +0.5 818,183 + Pf1N1B4_717 0.45 +1.6 818,184 - Pf1N1B4_717 0.45 -0.2 818,184 - Pf1N1B4_717 0.45 -1.0 818,184 - Pf1N1B4_717 0.45 +0.0 818,580 - Pf1N1B4_717 0.82 +0.2 818,672 + +1.0 818,672 + +1.4 818,672 + +0.6 818,672 + -2.3
Or see this region's nucleotide sequence