Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5061
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,606,180 | + | Pf1N1B4_5060 | 0.58 | +0.6 | |
5,606,338 | + | +0.6 | |||
5,606,425 | + | Pf1N1B4_5060 | 0.69 | +1.2 | |
5,606,528 | + | Pf1N1B4_5060 | 0.74 | -2.0 | |
5,606,611 | + | -0.1 | |||
5,606,753 | + | Pf1N1B4_5060 | 0.84 | -0.0 | |
5,606,753 | + | Pf1N1B4_5060 | 0.84 | -0.1 | |
5,606,754 | - | Pf1N1B4_5060 | 0.84 | +1.8 | |
5,606,909 | + | -2.4 | |||
5,606,937 | - | -0.1 | |||
5,607,026 | + | -2.4 | |||
5,607,026 | + | -0.7 | |||
5,607,026 | + | -1.4 | |||
5,607,027 | - | -0.4 | |||
5,607,027 | - | -1.0 | |||
5,607,027 | - | +0.6 | |||
5,607,134 | + | Pf1N1B4_5061 | 0.13 | -0.1 | |
5,607,135 | - | Pf1N1B4_5061 | 0.13 | +0.3 | |
5,607,147 | + | Pf1N1B4_5061 | 0.17 | -1.1 | |
5,607,179 | + | Pf1N1B4_5061 | 0.28 | -1.0 | |
5,607,179 | + | Pf1N1B4_5061 | 0.28 | -0.8 | |
5,607,179 | + | Pf1N1B4_5061 | 0.28 | -1.4 | |
5,607,180 | - | Pf1N1B4_5061 | 0.28 | -0.4 | |
5,607,180 | - | Pf1N1B4_5061 | 0.28 | -0.8 | |
5,607,876 | - | Pf1N1B4_5062 | 0.15 | +0.8 | |
5,608,024 | + | -0.4 | |||
5,608,025 | - | Pf1N1B4_5062 | 0.25 | +0.2 | |
5,608,062 | - | Pf1N1B4_5062 | 0.28 | -0.6 | |
5,608,062 | - | Pf1N1B4_5062 | 0.28 | +1.3 | |
5,608,062 | - | Pf1N1B4_5062 | 0.28 | -2.4 |
Or see this region's nucleotide sequence