Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5013
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,563,151 | - | Pf1N1B4_5012 | 0.18 | -0.4 | |
| 5,563,734 | + | Pf1N1B4_5012 | 0.76 | +0.6 | |
| 5,563,735 | - | Pf1N1B4_5012 | 0.76 | -1.0 | |
| 5,563,989 | + | -2.0 | |||
| 5,563,989 | + | +0.1 | |||
| 5,563,989 | + | +1.6 | |||
| 5,563,990 | - | -0.4 | |||
| 5,563,990 | - | +0.5 | |||
| 5,563,991 | + | -2.4 | |||
| 5,563,991 | + | -1.4 | |||
| 5,564,058 | + | -1.4 | |||
| 5,564,228 | + | Pf1N1B4_5013 | 0.13 | -2.0 | |
| 5,564,794 | + | Pf1N1B4_5013 | 0.69 | -0.9 | |
| 5,565,463 | - | -0.1 | |||
| 5,565,546 | - | Pf1N1B4_5014 | 0.32 | -1.4 | |
| 5,565,578 | - | -2.0 | |||
| 5,565,578 | - | Pf1N1B4_5014 | 0.35 | -2.0 | |
| 5,565,719 | - | Pf1N1B4_5014 | 0.45 | -1.8 | |
| 5,565,719 | - | Pf1N1B4_5014 | 0.45 | +1.9 | |
| 5,565,940 | - | Pf1N1B4_5014 | 0.61 | +0.0 |
Or see this region's nucleotide sequence