Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4610 and Pf1N1B4_4611 overlap by 4 nucleotides Pf1N1B4_4611 and Pf1N1B4_4612 are separated by 30 nucleotides Pf1N1B4_4612 and Pf1N1B4_4613 overlap by 4 nucleotides Pf1N1B4_4613 and Pf1N1B4_4614 are separated by 10 nucleotides
Pf1N1B4_4610 - Diadenosine tetraphosphatase and related serine/threonine protein phosphatases, at 5,080,368 to 5,080,904
_4610
Pf1N1B4_4611 - GlpG protein (membrane protein of glp regulon), at 5,080,901 to 5,081,773
_4611
Pf1N1B4_4612 - FIG00954117: hypothetical protein, at 5,081,804 to 5,082,064
_4612
Pf1N1B4_4613 - FIG00953934: hypothetical protein, at 5,082,061 to 5,082,891
_4613
Pf1N1B4_4614 - Membrane alanine aminopeptidase N (EC 3.4.11.2), at 5,082,902 to 5,085,559
_4614
Position (kb) 5081
5082
5083 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5080.859 kb on + strand at 5080.920 kb on + strand at 5080.920 kb on + strand at 5080.920 kb on + strand at 5080.920 kb on + strand at 5080.921 kb on - strand at 5081.019 kb on + strand, within Pf1N1B4_4611 at 5081.136 kb on + strand, within Pf1N1B4_4611 at 5081.477 kb on + strand, within Pf1N1B4_4611 at 5081.477 kb on + strand, within Pf1N1B4_4611 at 5081.477 kb on + strand, within Pf1N1B4_4611 at 5081.477 kb on + strand, within Pf1N1B4_4611 at 5081.477 kb on + strand, within Pf1N1B4_4611 at 5081.744 kb on + strand at 5081.744 kb on + strand at 5081.745 kb on - strand at 5081.772 kb on - strand at 5081.776 kb on + strand at 5081.776 kb on + strand at 5081.777 kb on - strand at 5081.777 kb on - strand at 5081.777 kb on - strand at 5081.849 kb on + strand, within Pf1N1B4_4612 at 5081.849 kb on + strand, within Pf1N1B4_4612 at 5081.850 kb on - strand, within Pf1N1B4_4612 at 5081.850 kb on - strand, within Pf1N1B4_4612 at 5081.850 kb on - strand, within Pf1N1B4_4612 at 5081.987 kb on + strand at 5081.988 kb on - strand, within Pf1N1B4_4612 at 5082.197 kb on - strand, within Pf1N1B4_4613 at 5082.329 kb on - strand, within Pf1N1B4_4613 at 5082.329 kb on - strand, within Pf1N1B4_4613 at 5082.578 kb on + strand, within Pf1N1B4_4613 at 5082.855 kb on + strand at 5082.859 kb on + strand at 5082.859 kb on + strand at 5082.860 kb on - strand at 5082.902 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,080,859 + +0.5 5,080,920 + +0.6 5,080,920 + -0.4 5,080,920 + -1.0 5,080,920 + -1.4 5,080,921 - -1.0 5,081,019 + Pf1N1B4_4611 0.14 +0.2 5,081,136 + Pf1N1B4_4611 0.27 -0.4 5,081,477 + Pf1N1B4_4611 0.66 -3.0 5,081,477 + Pf1N1B4_4611 0.66 -1.0 5,081,477 + Pf1N1B4_4611 0.66 +1.4 5,081,477 + Pf1N1B4_4611 0.66 -1.4 5,081,477 + Pf1N1B4_4611 0.66 -1.0 5,081,744 + -1.0 5,081,744 + -0.5 5,081,745 - -2.0 5,081,772 - -1.4 5,081,776 + +1.2 5,081,776 + -2.0 5,081,777 - -1.4 5,081,777 - +0.4 5,081,777 - -0.4 5,081,849 + Pf1N1B4_4612 0.17 -1.1 5,081,849 + Pf1N1B4_4612 0.17 -2.4 5,081,850 - Pf1N1B4_4612 0.18 -0.4 5,081,850 - Pf1N1B4_4612 0.18 -0.4 5,081,850 - Pf1N1B4_4612 0.18 -1.4 5,081,987 + -0.4 5,081,988 - Pf1N1B4_4612 0.70 -1.6 5,082,197 - Pf1N1B4_4613 0.16 -0.4 5,082,329 - Pf1N1B4_4613 0.32 +0.1 5,082,329 - Pf1N1B4_4613 0.32 +0.0 5,082,578 + Pf1N1B4_4613 0.62 -1.1 5,082,855 + -1.7 5,082,859 + -0.8 5,082,859 + +1.0 5,082,860 - -0.4 5,082,902 - -0.4
Or see this region's nucleotide sequence