Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4038
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,488,782 | + | Pf1N1B4_4037 | 0.29 | -1.5 | |
4,488,783 | - | Pf1N1B4_4037 | 0.29 | -1.2 | |
4,488,783 | - | Pf1N1B4_4037 | 0.29 | -0.7 | |
4,489,185 | - | -0.2 | |||
4,489,310 | + | Pf1N1B4_4037 | 0.68 | +0.2 | |
4,489,741 | - | -1.2 | |||
4,489,741 | - | -1.0 | |||
4,489,741 | - | -1.5 | |||
4,489,745 | - | -0.6 | |||
4,490,011 | + | Pf1N1B4_4038 | 0.55 | -2.0 | |
4,490,011 | + | Pf1N1B4_4038 | 0.55 | -1.9 | |
4,490,012 | - | Pf1N1B4_4038 | 0.55 | -0.2 | |
4,490,273 | - | +0.7 | |||
4,490,354 | - | -0.8 | |||
4,490,404 | - | -1.2 | |||
4,490,404 | - | -1.2 | |||
4,490,563 | - | Pf1N1B4_4039 | 0.18 | -0.2 | |
4,490,950 | - | Pf1N1B4_4039 | 0.40 | -0.2 | |
4,490,998 | - | Pf1N1B4_4039 | 0.43 | -2.7 | |
4,491,060 | + | Pf1N1B4_4039 | 0.46 | +0.8 | |
4,491,060 | + | Pf1N1B4_4039 | 0.46 | -1.8 | |
4,491,060 | + | Pf1N1B4_4039 | 0.46 | -1.8 | |
4,491,061 | - | Pf1N1B4_4039 | 0.46 | +0.2 | |
4,491,061 | - | Pf1N1B4_4039 | 0.46 | -1.4 | |
4,491,061 | - | Pf1N1B4_4039 | 0.46 | +0.8 | |
4,491,061 | - | Pf1N1B4_4039 | 0.46 | +0.4 |
Or see this region's nucleotide sequence