Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3701
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,109,505 | + | Pf1N1B4_3700 | 0.61 | +1.8 | |
4,109,506 | - | Pf1N1B4_3700 | 0.61 | -1.2 | |
4,109,506 | - | -0.2 | |||
4,109,586 | + | Pf1N1B4_3700 | 0.69 | -1.8 | |
4,109,587 | - | Pf1N1B4_3700 | 0.69 | -2.5 | |
4,109,587 | - | Pf1N1B4_3700 | 0.69 | +0.1 | |
4,109,656 | - | Pf1N1B4_3700 | 0.75 | -1.2 | |
4,109,875 | - | -0.2 | |||
4,109,875 | - | +0.3 | |||
4,109,875 | - | -2.2 | |||
4,109,875 | - | -3.0 | |||
4,109,875 | - | -1.5 | |||
4,109,875 | - | -1.0 | |||
4,109,875 | - | -1.2 | |||
4,109,875 | - | -2.5 | |||
4,109,893 | - | -0.2 | |||
4,109,893 | - | -2.0 | |||
4,109,893 | - | -1.8 | |||
4,109,893 | - | -0.2 | |||
4,109,919 | + | -2.8 | |||
4,110,896 | - | -2.0 | |||
4,110,976 | + | +1.0 | |||
4,110,977 | - | +0.5 | |||
4,111,000 | + | -0.4 | |||
4,111,000 | + | -0.8 | |||
4,111,000 | + | -1.6 | |||
4,111,635 | + | Pf1N1B4_3702 | 0.85 | -2.0 | |
4,111,719 | + | +0.8 | |||
4,111,734 | + | +2.0 | |||
4,111,746 | - | +0.8 | |||
4,111,753 | + | +1.4 |
Or see this region's nucleotide sequence