Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2695 and Pf1N1B4_2696 are separated by 182 nucleotides Pf1N1B4_2696 and Pf1N1B4_2697 are separated by 80 nucleotides Pf1N1B4_2697 and Pf1N1B4_2698 overlap by 1 nucleotides
Pf1N1B4_2695 - Rare lipoprotein A precursor, at 3,032,246 to 3,033,241
_2695
Pf1N1B4_2696 - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4), at 3,033,424 to 3,034,581
_2696
Pf1N1B4_2697 - Proposed lipoate regulatory protein YbeD, at 3,034,662 to 3,034,937
_2697
Pf1N1B4_2698 - Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase, at 3,034,937 to 3,035,584
_2698
Position (kb)
3033
3034
3035 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3032.881 kb on + strand, within Pf1N1B4_2695 at 3032.997 kb on + strand, within Pf1N1B4_2695 at 3032.997 kb on + strand, within Pf1N1B4_2695 at 3033.014 kb on + strand, within Pf1N1B4_2695 at 3033.014 kb on + strand, within Pf1N1B4_2695 at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.246 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.249 kb on + strand at 3033.379 kb on + strand at 3033.379 kb on + strand at 3035.565 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,032,881 + Pf1N1B4_2695 0.64 +0.2 3,032,997 + Pf1N1B4_2695 0.75 -1.1 3,032,997 + Pf1N1B4_2695 0.75 +2.2 3,033,014 + Pf1N1B4_2695 0.77 +1.4 3,033,014 + Pf1N1B4_2695 0.77 +1.2 3,033,246 + +1.7 3,033,246 + +2.2 3,033,246 + +3.3 3,033,246 + +1.1 3,033,246 + +2.1 3,033,246 + +1.0 3,033,246 + +3.7 3,033,246 + +0.2 3,033,246 + +1.2 3,033,246 + +1.7 3,033,246 + +0.2 3,033,246 + +1.3 3,033,246 + +0.9 3,033,246 + +2.8 3,033,246 + +0.9 3,033,246 + +0.3 3,033,246 + -0.6 3,033,246 + +2.2 3,033,246 + +0.5 3,033,246 + +2.3 3,033,249 + -0.7 3,033,249 + +1.7 3,033,249 + +3.7 3,033,249 + +3.1 3,033,249 + +1.7 3,033,249 + +1.0 3,033,249 + +2.3 3,033,249 + +0.7 3,033,379 + +0.8 3,033,379 + +0.9 3,035,565 + -0.4
Or see this region's nucleotide sequence