Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2693 and Pf1N1B4_2694 are separated by 17 nucleotides Pf1N1B4_2694 and Pf1N1B4_2695 are separated by 14 nucleotides
Pf1N1B4_2693 - Rod shape-determining protein RodA, at 3,030,058 to 3,031,203
_2693
Pf1N1B4_2694 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 3,031,221 to 3,032,231
_2694
Pf1N1B4_2695 - Rare lipoprotein A precursor, at 3,032,246 to 3,033,241
_2695
Position (kb)
3031
3032
3033 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3031.205 kb on + strand at 3031.205 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.228 kb on + strand at 3031.229 kb on - strand at 3031.273 kb on + strand at 3031.273 kb on + strand at 3031.273 kb on + strand at 3031.286 kb on + strand at 3031.317 kb on + strand at 3031.365 kb on + strand, within Pf1N1B4_2694 at 3031.366 kb on - strand, within Pf1N1B4_2694 at 3031.476 kb on + strand at 3031.476 kb on + strand, within Pf1N1B4_2694 at 3031.569 kb on + strand, within Pf1N1B4_2694 at 3031.569 kb on + strand, within Pf1N1B4_2694 at 3031.570 kb on - strand, within Pf1N1B4_2694 at 3031.570 kb on - strand, within Pf1N1B4_2694 at 3031.570 kb on - strand at 3031.570 kb on - strand, within Pf1N1B4_2694 at 3031.680 kb on + strand, within Pf1N1B4_2694 at 3031.776 kb on + strand, within Pf1N1B4_2694 at 3031.776 kb on + strand, within Pf1N1B4_2694 at 3031.776 kb on + strand, within Pf1N1B4_2694 at 3031.776 kb on + strand, within Pf1N1B4_2694 at 3031.776 kb on + strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.777 kb on - strand, within Pf1N1B4_2694 at 3031.827 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.859 kb on + strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.860 kb on - strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.862 kb on + strand, within Pf1N1B4_2694 at 3031.863 kb on - strand, within Pf1N1B4_2694 at 3031.905 kb on + strand, within Pf1N1B4_2694 at 3031.905 kb on + strand, within Pf1N1B4_2694 at 3031.905 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.975 kb on + strand, within Pf1N1B4_2694 at 3031.976 kb on - strand, within Pf1N1B4_2694 at 3031.976 kb on - strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.069 kb on + strand, within Pf1N1B4_2694 at 3032.115 kb on + strand, within Pf1N1B4_2694 at 3032.156 kb on + strand at 3032.156 kb on + strand at 3032.156 kb on + strand at 3032.156 kb on + strand at 3032.156 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.172 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.185 kb on + strand at 3032.229 kb on + strand at 3032.229 kb on + strand at 3032.229 kb on + strand at 3032.229 kb on + strand at 3032.229 kb on + strand at 3032.229 kb on + strand at 3032.245 kb on + strand at 3032.245 kb on + strand at 3032.245 kb on + strand at 3032.881 kb on + strand, within Pf1N1B4_2695 at 3032.997 kb on + strand, within Pf1N1B4_2695 at 3032.997 kb on + strand, within Pf1N1B4_2695 at 3033.014 kb on + strand, within Pf1N1B4_2695 at 3033.014 kb on + strand, within Pf1N1B4_2695
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,031,205 + +0.7 3,031,205 + +0.8 3,031,228 + +3.6 3,031,228 + +0.2 3,031,228 + +3.4 3,031,228 + +1.0 3,031,228 + +1.6 3,031,228 + +1.0 3,031,228 + +1.7 3,031,228 + +2.0 3,031,228 + -0.8 3,031,229 - -0.2 3,031,273 + +2.1 3,031,273 + +2.3 3,031,273 + +2.0 3,031,286 + +0.6 3,031,317 + +0.6 3,031,365 + Pf1N1B4_2694 0.14 -1.4 3,031,366 - Pf1N1B4_2694 0.14 -1.2 3,031,476 + +2.5 3,031,476 + Pf1N1B4_2694 0.25 -1.2 3,031,569 + Pf1N1B4_2694 0.34 +1.6 3,031,569 + Pf1N1B4_2694 0.34 +1.1 3,031,570 - Pf1N1B4_2694 0.35 +1.2 3,031,570 - Pf1N1B4_2694 0.35 +0.5 3,031,570 - -0.8 3,031,570 - Pf1N1B4_2694 0.35 -1.4 3,031,680 + Pf1N1B4_2694 0.45 +1.7 3,031,776 + Pf1N1B4_2694 0.55 +0.5 3,031,776 + Pf1N1B4_2694 0.55 +2.0 3,031,776 + Pf1N1B4_2694 0.55 +0.5 3,031,776 + Pf1N1B4_2694 0.55 +2.4 3,031,776 + Pf1N1B4_2694 0.55 +0.5 3,031,777 - Pf1N1B4_2694 0.55 -1.1 3,031,777 - Pf1N1B4_2694 0.55 -0.6 3,031,777 - Pf1N1B4_2694 0.55 -0.8 3,031,777 - Pf1N1B4_2694 0.55 -0.6 3,031,777 - Pf1N1B4_2694 0.55 +0.9 3,031,777 - Pf1N1B4_2694 0.55 -2.6 3,031,827 + Pf1N1B4_2694 0.60 +2.8 3,031,859 + Pf1N1B4_2694 0.63 +1.0 3,031,859 + Pf1N1B4_2694 0.63 +1.5 3,031,859 + Pf1N1B4_2694 0.63 +1.2 3,031,859 + Pf1N1B4_2694 0.63 +1.2 3,031,859 + Pf1N1B4_2694 0.63 +2.4 3,031,859 + Pf1N1B4_2694 0.63 +1.2 3,031,859 + Pf1N1B4_2694 0.63 +2.1 3,031,859 + Pf1N1B4_2694 0.63 +2.2 3,031,859 + Pf1N1B4_2694 0.63 +2.7 3,031,859 + Pf1N1B4_2694 0.63 +1.6 3,031,860 - Pf1N1B4_2694 0.63 +1.4 3,031,860 - Pf1N1B4_2694 0.63 +1.3 3,031,860 - Pf1N1B4_2694 0.63 -0.6 3,031,860 - Pf1N1B4_2694 0.63 -1.8 3,031,860 - Pf1N1B4_2694 0.63 +0.2 3,031,860 - Pf1N1B4_2694 0.63 -0.1 3,031,862 + Pf1N1B4_2694 0.63 +3.9 3,031,862 + Pf1N1B4_2694 0.63 +1.1 3,031,862 + Pf1N1B4_2694 0.63 +1.6 3,031,862 + Pf1N1B4_2694 0.63 +0.5 3,031,862 + Pf1N1B4_2694 0.63 +2.1 3,031,862 + Pf1N1B4_2694 0.63 +1.6 3,031,862 + Pf1N1B4_2694 0.63 +1.9 3,031,862 + Pf1N1B4_2694 0.63 +1.5 3,031,863 - Pf1N1B4_2694 0.64 -1.8 3,031,905 + Pf1N1B4_2694 0.68 +2.9 3,031,905 + Pf1N1B4_2694 0.68 +0.8 3,031,905 + Pf1N1B4_2694 0.68 +2.0 3,031,975 + Pf1N1B4_2694 0.75 +1.6 3,031,975 + Pf1N1B4_2694 0.75 +0.5 3,031,975 + Pf1N1B4_2694 0.75 +2.3 3,031,975 + Pf1N1B4_2694 0.75 +1.2 3,031,975 + Pf1N1B4_2694 0.75 +0.5 3,031,975 + Pf1N1B4_2694 0.75 +2.9 3,031,975 + Pf1N1B4_2694 0.75 +2.5 3,031,975 + Pf1N1B4_2694 0.75 +0.2 3,031,976 - Pf1N1B4_2694 0.75 -0.2 3,031,976 - Pf1N1B4_2694 0.75 +1.7 3,032,069 + Pf1N1B4_2694 0.84 +2.2 3,032,069 + Pf1N1B4_2694 0.84 +2.0 3,032,069 + Pf1N1B4_2694 0.84 +1.7 3,032,069 + Pf1N1B4_2694 0.84 +1.0 3,032,069 + Pf1N1B4_2694 0.84 +1.0 3,032,069 + Pf1N1B4_2694 0.84 +2.2 3,032,115 + Pf1N1B4_2694 0.88 +3.4 3,032,156 + +1.9 3,032,156 + +1.6 3,032,156 + +1.6 3,032,156 + +2.3 3,032,156 + +1.7 3,032,172 + +1.6 3,032,172 + +1.7 3,032,172 + +1.7 3,032,172 + +1.9 3,032,172 + +2.7 3,032,172 + +1.0 3,032,172 + +2.3 3,032,172 + +0.6 3,032,172 + +3.4 3,032,185 + -0.8 3,032,185 + +1.9 3,032,185 + +2.5 3,032,185 + +1.7 3,032,185 + +0.9 3,032,185 + +2.4 3,032,185 + +1.6 3,032,185 + -0.6 3,032,185 + +1.4 3,032,185 + +1.4 3,032,229 + +3.2 3,032,229 + +1.9 3,032,229 + +1.8 3,032,229 + +0.5 3,032,229 + -0.2 3,032,229 + -0.6 3,032,245 + +0.3 3,032,245 + +0.9 3,032,245 + +2.2 3,032,881 + Pf1N1B4_2695 0.64 +0.2 3,032,997 + Pf1N1B4_2695 0.75 -1.1 3,032,997 + Pf1N1B4_2695 0.75 +2.2 3,033,014 + Pf1N1B4_2695 0.77 +1.4 3,033,014 + Pf1N1B4_2695 0.77 +1.2
Or see this region's nucleotide sequence