Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2412
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,731,980 | - | Pf1N1B4_2411 | 0.81 | +0.1 | |
2,732,379 | - | -1.3 | |||
2,732,434 | + | -1.3 | |||
2,732,435 | - | -1.7 | |||
2,732,435 | - | -1.3 | |||
2,732,435 | - | -2.7 | |||
2,732,527 | - | Pf1N1B4_2412 | 0.13 | -0.7 | |
2,732,527 | - | Pf1N1B4_2412 | 0.13 | -2.3 | |
2,732,527 | - | Pf1N1B4_2412 | 0.13 | +0.8 | |
2,732,527 | - | Pf1N1B4_2412 | 0.13 | -0.7 | |
2,732,792 | + | Pf1N1B4_2412 | 0.33 | -3.1 | |
2,732,843 | + | +0.7 | |||
2,732,844 | - | Pf1N1B4_2412 | 0.36 | -1.3 | |
2,732,844 | - | Pf1N1B4_2412 | 0.36 | -1.3 | |
2,732,869 | - | Pf1N1B4_2412 | 0.38 | -3.1 | |
2,733,055 | + | Pf1N1B4_2412 | 0.52 | +1.3 | |
2,733,055 | + | Pf1N1B4_2412 | 0.52 | -1.1 | |
2,733,055 | + | Pf1N1B4_2412 | 0.52 | +0.3 | |
2,733,056 | - | Pf1N1B4_2412 | 0.52 | -0.5 | |
2,733,227 | - | Pf1N1B4_2412 | 0.64 | -1.7 | |
2,733,698 | + | -1.3 | |||
2,733,698 | + | -2.3 | |||
2,733,701 | + | -1.5 | |||
2,733,701 | + | -2.7 | |||
2,733,702 | - | -3.3 | |||
2,733,702 | - | -1.5 | |||
2,733,702 | - | -2.3 | |||
2,733,760 | + | -2.7 | |||
2,733,760 | + | -2.5 | |||
2,733,760 | + | -3.5 | |||
2,733,761 | - | -2.1 | |||
2,733,761 | - | -1.1 | |||
2,733,790 | - | +0.3 | |||
2,733,800 | - | -1.5 | |||
2,733,807 | - | -2.1 |
Or see this region's nucleotide sequence