Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2281 and Pf1N1B4_2282 are separated by 54 nucleotides Pf1N1B4_2282 and Pf1N1B4_2283 are separated by 143 nucleotides Pf1N1B4_2283 and Pf1N1B4_2284 are separated by 22 nucleotides
Pf1N1B4_2281 - Predicted integral membrane protein, at 2,596,632 to 2,597,123
_2281
Pf1N1B4_2282 - Phosphoserine phosphatase (EC 3.1.3.3), at 2,597,178 to 2,597,834
_2282
Pf1N1B4_2283 - Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-), at 2,597,978 to 2,598,457
_2283
Pf1N1B4_2284 - FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated, at 2,598,480 to 2,600,759
_2284
Position (kb)
2597
2598
2599 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2596.982 kb on + strand, within Pf1N1B4_2281 at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.121 kb on + strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.122 kb on - strand at 2597.125 kb on + strand at 2597.125 kb on + strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.126 kb on - strand at 2597.305 kb on + strand, within Pf1N1B4_2282 at 2597.305 kb on + strand, within Pf1N1B4_2282 at 2597.305 kb on + strand, within Pf1N1B4_2282 at 2597.306 kb on - strand, within Pf1N1B4_2282 at 2597.306 kb on - strand, within Pf1N1B4_2282 at 2597.306 kb on - strand, within Pf1N1B4_2282 at 2597.306 kb on - strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.311 kb on + strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.312 kb on - strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.596 kb on + strand, within Pf1N1B4_2282 at 2597.597 kb on - strand, within Pf1N1B4_2282 at 2597.597 kb on - strand, within Pf1N1B4_2282 at 2597.665 kb on + strand, within Pf1N1B4_2282 at 2597.665 kb on + strand, within Pf1N1B4_2282 at 2597.695 kb on + strand, within Pf1N1B4_2282 at 2597.695 kb on + strand, within Pf1N1B4_2282 at 2597.695 kb on + strand, within Pf1N1B4_2282 at 2597.695 kb on + strand, within Pf1N1B4_2282 at 2597.696 kb on - strand, within Pf1N1B4_2282 at 2597.696 kb on - strand, within Pf1N1B4_2282 at 2597.704 kb on + strand, within Pf1N1B4_2282 at 2597.704 kb on + strand, within Pf1N1B4_2282 at 2597.704 kb on + strand, within Pf1N1B4_2282 at 2597.705 kb on - strand, within Pf1N1B4_2282 at 2597.728 kb on + strand, within Pf1N1B4_2282 at 2597.728 kb on + strand, within Pf1N1B4_2282 at 2597.728 kb on + strand, within Pf1N1B4_2282 at 2597.728 kb on + strand, within Pf1N1B4_2282 at 2597.728 kb on + strand, within Pf1N1B4_2282 at 2597.729 kb on - strand, within Pf1N1B4_2282 at 2597.764 kb on + strand, within Pf1N1B4_2282 at 2597.764 kb on + strand, within Pf1N1B4_2282 at 2597.764 kb on + strand, within Pf1N1B4_2282 at 2597.765 kb on - strand, within Pf1N1B4_2282 at 2597.765 kb on - strand, within Pf1N1B4_2282 at 2597.820 kb on + strand at 2597.835 kb on + strand at 2597.835 kb on + strand at 2597.835 kb on + strand at 2597.841 kb on + strand at 2597.842 kb on - strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.901 kb on + strand at 2597.902 kb on - strand at 2597.902 kb on - strand at 2597.902 kb on - strand at 2597.902 kb on - strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.906 kb on + strand at 2597.907 kb on - strand at 2597.907 kb on - strand at 2597.907 kb on - strand at 2597.907 kb on - strand at 2597.907 kb on - strand at 2598.362 kb on + strand, within Pf1N1B4_2283 at 2598.362 kb on + strand, within Pf1N1B4_2283 at 2598.488 kb on + strand at 2598.515 kb on + strand at 2598.600 kb on + strand at 2598.771 kb on + strand, within Pf1N1B4_2284 at 2599.234 kb on - strand, within Pf1N1B4_2284 at 2599.368 kb on + strand, within Pf1N1B4_2284 at 2599.422 kb on + strand, within Pf1N1B4_2284 at 2599.423 kb on - strand, within Pf1N1B4_2284
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,596,982 + Pf1N1B4_2281 0.71 +0.2 2,597,121 + +1.2 2,597,121 + +0.2 2,597,121 + +0.8 2,597,121 + +0.5 2,597,121 + +1.8 2,597,121 + -1.6 2,597,121 + -1.3 2,597,121 + -0.8 2,597,121 + -2.1 2,597,121 + -0.2 2,597,121 + -0.2 2,597,121 + +2.2 2,597,121 + +0.5 2,597,121 + +0.2 2,597,121 + +1.7 2,597,121 + -1.1 2,597,121 + -0.5 2,597,121 + +0.5 2,597,121 + -2.1 2,597,121 + -1.8 2,597,121 + -0.9 2,597,121 + -0.6 2,597,121 + -0.4 2,597,121 + -1.3 2,597,121 + +1.6 2,597,121 + +1.2 2,597,121 + -0.8 2,597,122 - -2.3 2,597,122 - +1.0 2,597,122 - -0.8 2,597,122 - -1.3 2,597,122 - -2.1 2,597,122 - +2.2 2,597,122 - -0.6 2,597,122 - +0.6 2,597,122 - -2.3 2,597,122 - +1.5 2,597,122 - +0.2 2,597,122 - -1.4 2,597,122 - -1.0 2,597,122 - +0.9 2,597,122 - +1.8 2,597,122 - -1.6 2,597,122 - -1.3 2,597,122 - -0.4 2,597,122 - -1.8 2,597,122 - -0.8 2,597,122 - -2.9 2,597,122 - +1.0 2,597,122 - -1.3 2,597,122 - -2.3 2,597,122 - +0.4 2,597,122 - -2.6 2,597,125 + -0.8 2,597,125 + +0.2 2,597,126 - +0.8 2,597,126 - +0.2 2,597,126 - +0.7 2,597,126 - -0.2 2,597,126 - -0.1 2,597,126 - -0.3 2,597,126 - +1.6 2,597,126 - +0.8 2,597,305 + Pf1N1B4_2282 0.19 -1.3 2,597,305 + Pf1N1B4_2282 0.19 -0.3 2,597,305 + Pf1N1B4_2282 0.19 -1.1 2,597,306 - Pf1N1B4_2282 0.19 -0.7 2,597,306 - Pf1N1B4_2282 0.19 -2.3 2,597,306 - Pf1N1B4_2282 0.19 +0.7 2,597,306 - Pf1N1B4_2282 0.19 -0.7 2,597,311 + Pf1N1B4_2282 0.20 -1.7 2,597,311 + Pf1N1B4_2282 0.20 +2.6 2,597,311 + Pf1N1B4_2282 0.20 -0.9 2,597,311 + Pf1N1B4_2282 0.20 +1.0 2,597,311 + Pf1N1B4_2282 0.20 -0.2 2,597,311 + Pf1N1B4_2282 0.20 -1.9 2,597,311 + Pf1N1B4_2282 0.20 -1.7 2,597,311 + Pf1N1B4_2282 0.20 -1.4 2,597,312 - Pf1N1B4_2282 0.20 -1.5 2,597,312 - Pf1N1B4_2282 0.20 -0.7 2,597,312 - Pf1N1B4_2282 0.20 -3.3 2,597,312 - Pf1N1B4_2282 0.20 +1.1 2,597,312 - Pf1N1B4_2282 0.20 -0.5 2,597,312 - Pf1N1B4_2282 0.20 -2.1 2,597,312 - Pf1N1B4_2282 0.20 -1.3 2,597,312 - Pf1N1B4_2282 0.20 -0.7 2,597,312 - Pf1N1B4_2282 0.20 -2.1 2,597,596 + Pf1N1B4_2282 0.64 -1.6 2,597,596 + Pf1N1B4_2282 0.64 -2.3 2,597,596 + Pf1N1B4_2282 0.64 +0.3 2,597,596 + Pf1N1B4_2282 0.64 +0.3 2,597,596 + Pf1N1B4_2282 0.64 -0.7 2,597,596 + Pf1N1B4_2282 0.64 -3.1 2,597,597 - Pf1N1B4_2282 0.64 +0.7 2,597,597 - Pf1N1B4_2282 0.64 -0.5 2,597,665 + Pf1N1B4_2282 0.74 +0.1 2,597,665 + Pf1N1B4_2282 0.74 -1.3 2,597,695 + Pf1N1B4_2282 0.79 -0.1 2,597,695 + Pf1N1B4_2282 0.79 +0.3 2,597,695 + Pf1N1B4_2282 0.79 -2.2 2,597,695 + Pf1N1B4_2282 0.79 -0.1 2,597,696 - Pf1N1B4_2282 0.79 -0.5 2,597,696 - Pf1N1B4_2282 0.79 -2.1 2,597,704 + Pf1N1B4_2282 0.80 -0.5 2,597,704 + Pf1N1B4_2282 0.80 -1.1 2,597,704 + Pf1N1B4_2282 0.80 -0.7 2,597,705 - Pf1N1B4_2282 0.80 -1.3 2,597,728 + Pf1N1B4_2282 0.84 -2.1 2,597,728 + Pf1N1B4_2282 0.84 +1.3 2,597,728 + Pf1N1B4_2282 0.84 +2.4 2,597,728 + Pf1N1B4_2282 0.84 +3.4 2,597,728 + Pf1N1B4_2282 0.84 -1.5 2,597,729 - Pf1N1B4_2282 0.84 -2.7 2,597,764 + Pf1N1B4_2282 0.89 -0.6 2,597,764 + Pf1N1B4_2282 0.89 -0.2 2,597,764 + Pf1N1B4_2282 0.89 -1.7 2,597,765 - Pf1N1B4_2282 0.89 -2.3 2,597,765 - Pf1N1B4_2282 0.89 -2.3 2,597,820 + -0.4 2,597,835 + -1.7 2,597,835 + +0.9 2,597,835 + -0.5 2,597,841 + -1.2 2,597,842 - -0.7 2,597,901 + -1.3 2,597,901 + +0.7 2,597,901 + +0.9 2,597,901 + -0.8 2,597,901 + -2.1 2,597,901 + -1.3 2,597,901 + +0.7 2,597,901 + -2.9 2,597,901 + -0.5 2,597,901 + -0.5 2,597,901 + -0.2 2,597,901 + -0.6 2,597,901 + +0.5 2,597,901 + -0.7 2,597,901 + +1.3 2,597,901 + -0.1 2,597,901 + +0.3 2,597,901 + -1.0 2,597,901 + -0.7 2,597,901 + -0.7 2,597,901 + -0.7 2,597,901 + +0.2 2,597,902 - -0.7 2,597,902 - -0.7 2,597,902 - -0.7 2,597,902 - +1.1 2,597,906 + +0.1 2,597,906 + -0.4 2,597,906 + +0.7 2,597,906 + -1.0 2,597,906 + +1.1 2,597,906 + -1.5 2,597,906 + -0.7 2,597,906 + +0.3 2,597,906 + -2.1 2,597,906 + -1.2 2,597,906 + +1.6 2,597,906 + +0.6 2,597,906 + -1.8 2,597,906 + +0.3 2,597,906 + +1.0 2,597,906 + -0.7 2,597,906 + -0.7 2,597,906 + -0.1 2,597,906 + +0.5 2,597,906 + +0.8 2,597,906 + -0.3 2,597,906 + +1.3 2,597,906 + +1.1 2,597,906 + +2.6 2,597,906 + -0.7 2,597,906 + -0.3 2,597,906 + -0.6 2,597,906 + -1.2 2,597,906 + -0.2 2,597,907 - -0.7 2,597,907 - -0.3 2,597,907 - +0.3 2,597,907 - -1.7 2,597,907 - +1.6 2,598,362 + Pf1N1B4_2283 0.80 -1.3 2,598,362 + Pf1N1B4_2283 0.80 -2.5 2,598,488 + +0.8 2,598,515 + -1.0 2,598,600 + -0.7 2,598,771 + Pf1N1B4_2284 0.13 -0.7 2,599,234 - Pf1N1B4_2284 0.33 -0.7 2,599,368 + Pf1N1B4_2284 0.39 +0.4 2,599,422 + Pf1N1B4_2284 0.41 +0.8 2,599,423 - Pf1N1B4_2284 0.41 -1.1
Or see this region's nucleotide sequence