Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2005

Experiment: Cisplatin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.006 mg/ml
2,286,456	+		Pf1N1B4_2004	0.22	+0.6
2,286,457	-		Pf1N1B4_2004	0.22	-0.6
2,286,457	-		Pf1N1B4_2004	0.22	-1.2
2,286,749	-		Pf1N1B4_2004	0.56	-2.8
2,287,121	-				-1.6
2,287,234	+				+0.4
2,287,234	+				-2.2
2,287,234	+				+0.2
2,287,235	-				-1.9
2,287,235	-				-0.1
2,287,235	-				+0.6
2,287,259	+				-1.4
2,287,260	-				+2.4
2,287,270	-				+0.4
2,287,270	-				-0.3
2,287,270	-				-0.9
2,287,283	-				-0.7
2,287,283	-				+0.4
2,287,283	-				-1.4
2,287,283	-				-0.7
2,287,296	-				-1.2
2,287,296	-				-1.6
2,287,296	-				+0.6
2,287,305	-				-2.2
2,287,305	-				-0.2
2,287,305	-				-0.1
2,287,334	+				-0.2
2,287,334	+				+0.1
2,287,334	+				+0.1
2,287,334	+				-1.6
2,287,335	-				-0.1
2,287,335	-				+0.1
2,287,335	-				+0.3
2,287,335	-				-0.3
2,287,335	-				-0.1
2,287,335	-				-1.3
2,287,449	+				-1.5
2,287,449	+				+0.4
2,287,449	+				-0.8
2,287,449	+				+3.0
2,287,450	-				+0.1
2,287,450	-				-0.2
2,287,450	-				-1.2
2,287,450	-				-0.8
2,287,785	+		Pf1N1B4_2005	0.15	-1.2
2,288,632	-		Pf1N1B4_2005	0.54	-1.9
2,288,725	+		Pf1N1B4_2005	0.58	-2.6
2,289,096	+		Pf1N1B4_2005	0.75	-3.1
2,289,106	-				+3.4
2,289,151	+		Pf1N1B4_2005	0.78	-1.9
2,289,642	+		Pf1N1B4_2006	0.30	+0.4
2,289,642	+		Pf1N1B4_2006	0.30	-2.5
2,289,643	-		Pf1N1B4_2006	0.31	-0.1
2,289,643	-		Pf1N1B4_2006	0.31	-0.1
2,289,643	-		Pf1N1B4_2006	0.31	+1.4
2,289,643	-		Pf1N1B4_2006	0.31	+0.8
2,289,765	+				+1.7
2,289,766	-				-0.6
2,289,766	-				-0.6
2,289,795	+				-0.0
2,289,833	+				+1.8
2,289,833	+				-0.6
2,289,833	+				+0.6
2,289,833	+				+2.0
2,289,833	+				+0.8
2,289,833	+				+2.7
2,289,834	-				-2.3
2,289,834	-				-0.3
2,289,834	-				+0.1
2,289,834	-				+0.4
2,289,868	+				+0.2
2,289,868	+				-2.4
2,289,868	+				-1.6
2,289,868	+				+1.2
2,289,869	-				+1.4
2,289,869	-				+0.9
2,289,869	-				+0.8
2,289,869	-				+1.1
2,289,869	-				-1.6
2,289,870	+				+0.1
2,289,870	+				+1.2
2,289,870	+				-0.5
2,289,870	+				-2.4
2,289,870	+				-2.6
2,289,870	+				-1.1
2,289,871	-				+0.4
2,289,871	-				-0.2
2,289,871	-				+1.4
2,289,871	-				+0.1
2,289,890	-				-0.6
2,289,950	+				-0.4
2,289,951	-				-2.6
2,289,951	-				-0.9
2,289,989	+				+1.0
2,290,070	+				-0.6
2,290,071	-				+1.0
2,290,071	-				+1.7
2,290,071	-				-0.2
2,290,071	-				-1.9
2,290,071	-				+2.9
2,290,071	-				+0.2
2,290,189	+		Pf1N1B4_2007	0.10	-0.3
2,290,189	+		Pf1N1B4_2007	0.10	+0.1
2,290,189	+		Pf1N1B4_2007	0.10	-2.3
2,290,189	+		Pf1N1B4_2007	0.10	+0.2
2,290,189	+		Pf1N1B4_2007	0.10	+1.4
2,290,189	+		Pf1N1B4_2007	0.10	+0.7
2,290,189	+		Pf1N1B4_2007	0.10	+1.4
2,290,189	+		Pf1N1B4_2007	0.10	+0.4
2,290,190	-		Pf1N1B4_2007	0.10	+1.1
2,290,190	-		Pf1N1B4_2007	0.10	+0.6
2,290,190	-		Pf1N1B4_2007	0.10	-0.6
2,290,190	-		Pf1N1B4_2007	0.10	+1.9
2,290,190	-		Pf1N1B4_2007	0.10	-0.0
2,290,190	-		Pf1N1B4_2007	0.10	+2.4
2,290,190	-		Pf1N1B4_2007	0.10	-1.2
2,290,328	+		Pf1N1B4_2007	0.15	-0.8
2,290,329	-		Pf1N1B4_2007	0.15	+1.6
2,290,360	+		Pf1N1B4_2007	0.16	+0.5
2,290,360	+		Pf1N1B4_2007	0.16	-0.8
2,290,361	-		Pf1N1B4_2007	0.16	-2.6
2,290,446	+		Pf1N1B4_2007	0.19	+1.4
2,290,447	-		Pf1N1B4_2007	0.19	-0.5
2,290,447	-		Pf1N1B4_2007	0.19	-1.9
2,290,629	+		Pf1N1B4_2007	0.26	+0.4
2,290,629	+		Pf1N1B4_2007	0.26	+1.9
2,290,629	+		Pf1N1B4_2007	0.26	-2.4
2,290,629	+		Pf1N1B4_2007	0.26	+2.2
2,290,629	+		Pf1N1B4_2007	0.26	+0.8
2,290,630	-		Pf1N1B4_2007	0.26	+0.4
2,290,630	-		Pf1N1B4_2007	0.26	+0.2