Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1617

Experiment: Cisplatin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.006 mg/ml
1,859,405	+				+0.3
1,859,406	-		Pf1N1B4_1614	0.86	-2.8
1,859,406	-		Pf1N1B4_1614	0.86	+0.7
1,859,406	-		Pf1N1B4_1614	0.86	-1.3
1,859,406	-		Pf1N1B4_1614	0.86	-0.7
1,859,406	-		Pf1N1B4_1614	0.86	-0.7
1,859,406	-		Pf1N1B4_1614	0.86	-0.7
1,859,503	-				-0.1
1,859,504	+				-1.0
1,859,504	+				-0.1
1,859,504	+				-1.7
1,859,504	+				-0.7
1,859,505	-				+1.3
1,859,505	-				-0.3
1,859,505	-				-0.7
1,859,505	-				-0.5
1,859,505	-				+0.3
1,859,505	-				-0.4
1,859,505	-				-1.5
1,859,505	-				+1.3
1,859,514	+				-0.9
1,859,515	-				+1.2
1,859,515	-				-0.1
1,859,523	+				-2.0
1,859,523	+				-0.7
1,859,523	+				-1.7
1,859,524	-				-2.0
1,859,635	+		Pf1N1B4_1615	0.41	+0.1
1,859,635	+		Pf1N1B4_1615	0.41	-0.7
1,859,636	-		Pf1N1B4_1615	0.41	-0.3
1,859,636	-		Pf1N1B4_1615	0.41	+0.6
1,859,636	-		Pf1N1B4_1615	0.41	-0.3
1,859,728	-		Pf1N1B4_1615	0.77	-0.7
1,859,728	-		Pf1N1B4_1615	0.77	-1.0
1,859,728	-		Pf1N1B4_1615	0.77	+1.1
1,859,767	-				-2.3
1,859,767	-				+0.9
1,859,785	+				-2.5
1,860,222	-				-2.0
1,860,237	-				-1.8
1,860,239	-				+0.3
1,860,239	-				+2.1
1,860,239	-				-0.5
1,860,239	-				+1.7
1,860,239	-				-0.3
1,860,239	-				-0.8
1,860,239	-				-0.4
1,860,239	-				+0.6
1,860,239	-				-1.0
1,860,239	-				+1.9
1,860,249	+				-1.7
1,860,250	-				+0.9
1,860,292	+				-1.3
1,860,292	+				-0.7
1,860,292	+				+0.2
1,860,293	-				-1.3
1,860,293	-				-1.7
1,860,293	-				+1.0
1,860,293	-				-0.7
1,860,293	-				-3.8
1,860,293	-				+0.3
1,860,293	-				-0.1
1,860,293	-				+1.3
1,860,293	-				+2.1
1,860,293	-				-1.3
1,860,293	-				-2.3
1,860,293	-				-0.3
1,860,299	-				-0.9
1,860,299	-				-2.5
1,860,299	-				+0.3
1,860,307	-				+0.1
1,860,307	-				-0.9
1,860,307	-				-0.7
1,860,330	+				+2.5
1,860,330	+				-1.0
1,860,331	-				-1.0
1,860,331	-				-1.0
1,860,358	+				+1.0
1,860,359	-				-1.3
1,860,434	+				+0.3
1,860,434	+				-2.8
1,860,434	+				-0.7
1,860,435	-				-3.3
1,860,435	-				+0.3
1,860,435	-				-2.3
1,860,435	-				-1.3
1,860,435	-				-1.4
1,860,435	-				+0.3
1,860,435	-				-1.7
1,860,435	-				-0.7
1,860,584	+		Pf1N1B4_1617	0.15	+1.2
1,860,768	-		Pf1N1B4_1617	0.27	-1.3
1,860,768	-		Pf1N1B4_1617	0.27	-0.3
1,860,768	-		Pf1N1B4_1617	0.27	-1.4
1,860,768	-		Pf1N1B4_1617	0.27	-3.0
1,860,791	+		Pf1N1B4_1617	0.29	-0.5
1,860,792	-		Pf1N1B4_1617	0.29	-0.7
1,860,820	+		Pf1N1B4_1617	0.31	-2.3
1,860,820	+		Pf1N1B4_1617	0.31	+0.1
1,860,821	-		Pf1N1B4_1617	0.31	-1.7
1,860,914	+		Pf1N1B4_1617	0.37	-0.7
1,860,917	+		Pf1N1B4_1617	0.37	-1.0
1,860,918	-		Pf1N1B4_1617	0.37	-2.5
1,860,918	-		Pf1N1B4_1617	0.37	-1.0
1,860,962	+		Pf1N1B4_1617	0.40	-0.3
1,860,963	-		Pf1N1B4_1617	0.40	-0.4
1,860,963	-		Pf1N1B4_1617	0.40	+1.1
1,861,352	+		Pf1N1B4_1617	0.65	-0.4
1,861,353	-		Pf1N1B4_1617	0.65	+0.3
1,861,441	+		Pf1N1B4_1617	0.71	-1.3
1,861,441	+		Pf1N1B4_1617	0.71	-1.8
1,861,441	+		Pf1N1B4_1617	0.71	+0.3
1,861,441	+		Pf1N1B4_1617	0.71	-0.1
1,861,442	-		Pf1N1B4_1617	0.71	+0.3
1,861,442	-		Pf1N1B4_1617	0.71	-0.3
1,861,442	-		Pf1N1B4_1617	0.71	-1.7
1,861,442	-		Pf1N1B4_1617	0.71	-0.3
1,861,445	+		Pf1N1B4_1617	0.71	-2.5
1,861,445	+		Pf1N1B4_1617	0.71	-2.0
1,861,445	+		Pf1N1B4_1617	0.71	-2.5
1,861,445	+		Pf1N1B4_1617	0.71	-2.5
1,861,445	+		Pf1N1B4_1617	0.71	-0.7
1,861,445	+		Pf1N1B4_1617	0.71	-0.7
1,861,446	-		Pf1N1B4_1617	0.71	-1.0
1,861,446	-		Pf1N1B4_1617	0.71	-2.1
1,861,446	-		Pf1N1B4_1617	0.71	-2.3
1,861,446	-		Pf1N1B4_1617	0.71	-1.3
1,861,446	-		Pf1N1B4_1617	0.71	+3.7
1,861,517	+		Pf1N1B4_1617	0.76	+1.3
1,861,518	-		Pf1N1B4_1617	0.76	+0.7
1,861,538	+		Pf1N1B4_1617	0.77	-1.7
1,861,538	+		Pf1N1B4_1617	0.77	-1.7
1,861,539	-		Pf1N1B4_1617	0.78	-1.4
1,861,539	-		Pf1N1B4_1617	0.78	-0.1
1,861,539	-		Pf1N1B4_1617	0.78	-0.7
1,861,539	-		Pf1N1B4_1617	0.78	-1.7
1,861,572	+		Pf1N1B4_1617	0.80	+0.3
1,861,573	-		Pf1N1B4_1617	0.80	-1.3
1,861,573	-		Pf1N1B4_1617	0.80	+1.3
1,861,732	+				-1.5
1,861,732	+				-2.0
1,861,732	+				-0.9
1,861,732	+				-1.7
1,861,733	-				-1.3
1,861,733	-				-1.5
1,861,733	-				-1.8
1,861,733	-				-2.2
1,861,733	-				+0.0
1,861,757	+				+0.8
1,861,757	+				-1.3
1,861,757	+				-1.1
1,861,757	+				-0.7
1,861,757	+				-1.7
1,861,757	+				+0.3
1,861,757	+				-2.7
1,861,757	+				-1.5
1,861,757	+				-2.5
1,861,758	-				-1.7
1,861,758	-				-2.3
1,861,758	-				-1.3
1,861,758	-				-0.7
1,861,758	-				-0.3
1,861,758	-				-0.5
1,862,079	+				+0.3