Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
207 | + | +1.0 | |||
208 | - | +1.0 | |||
208 | - | -1.0 | |||
208 | - | -0.2 | |||
249 | + | -1.2 | |||
250 | - | -0.2 | |||
330 | + | +0.8 | |||
330 | + | -3.2 | |||
893 | + | -1.2 | |||
1,033 | - | -0.2 | |||
1,036 | + | -1.2 | |||
1,037 | - | -1.2 | |||
1,037 | - | -1.7 | |||
1,037 | - | -2.9 | |||
1,037 | - | -2.2 | |||
1,106 | - | +1.8 | |||
1,106 | - | -1.0 | |||
1,106 | - | -1.8 | |||
1,106 | - | -0.8 | |||
1,106 | - | -1.8 | |||
1,106 | - | +1.8 | |||
1,108 | - | +0.9 | |||
1,367 | + | Pf1N1B4_1 | 0.55 | -1.2 | |
1,367 | + | Pf1N1B4_1 | 0.55 | -0.2 | |
1,368 | - | Pf1N1B4_1 | 0.55 | -0.2 | |
1,385 | - | Pf1N1B4_1 | 0.58 | -3.0 | |
1,451 | + | Pf1N1B4_1 | 0.70 | -1.2 |
Or see this region's nucleotide sequence