Experiment: Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02570 and MMP_RS02575 are separated by 524 nucleotides MMP_RS02575 and MMP_RS02580 are separated by 373 nucleotides
MMP_RS02570: MMP_RS02570 - cation:proton antiporter, at 479,516 to 481,144
_RS02570
MMP_RS02575: MMP_RS02575 - CAAX prenyl protease Rce1, at 481,669 to 482,484
_RS02575
MMP_RS02580: MMP_RS02580 - cupin domain-containing protein, at 482,858 to 483,295
_RS02580
Position (kb) 481
482
483 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 480.830 kb on + strand, within MMP_RS02570 at 480.834 kb on + strand, within MMP_RS02570 at 480.834 kb on + strand, within MMP_RS02570 at 480.838 kb on - strand, within MMP_RS02570 at 480.839 kb on + strand, within MMP_RS02570 at 480.868 kb on + strand, within MMP_RS02570 at 480.879 kb on + strand, within MMP_RS02570 at 480.879 kb on + strand, within MMP_RS02570 at 480.881 kb on + strand, within MMP_RS02570 at 480.932 kb on - strand, within MMP_RS02570 at 480.933 kb on + strand, within MMP_RS02570 at 481.109 kb on - strand at 481.114 kb on - strand at 481.114 kb on - strand at 481.114 kb on - strand at 481.115 kb on + strand at 481.178 kb on - strand at 481.178 kb on - strand at 481.198 kb on - strand at 481.198 kb on - strand at 481.199 kb on + strand at 481.199 kb on + strand at 481.260 kb on + strand at 481.262 kb on + strand at 481.295 kb on + strand at 481.308 kb on - strand at 481.309 kb on + strand at 481.309 kb on + strand at 481.311 kb on + strand at 481.459 kb on - strand at 481.482 kb on - strand at 481.482 kb on - strand at 481.482 kb on - strand at 481.483 kb on + strand at 481.529 kb on - strand at 481.529 kb on - strand at 481.530 kb on + strand at 481.530 kb on + strand at 481.604 kb on - strand at 481.613 kb on - strand at 481.690 kb on + strand at 481.737 kb on + strand at 481.784 kb on - strand, within MMP_RS02575 at 481.787 kb on + strand, within MMP_RS02575 at 481.838 kb on - strand, within MMP_RS02575 at 481.882 kb on + strand, within MMP_RS02575 at 481.958 kb on - strand, within MMP_RS02575 at 481.958 kb on - strand, within MMP_RS02575 at 481.962 kb on + strand, within MMP_RS02575 at 481.974 kb on + strand, within MMP_RS02575 at 482.070 kb on + strand, within MMP_RS02575 at 482.154 kb on - strand, within MMP_RS02575 at 482.157 kb on + strand, within MMP_RS02575 at 482.249 kb on + strand, within MMP_RS02575 at 482.255 kb on - strand, within MMP_RS02575 at 482.293 kb on + strand, within MMP_RS02575 at 482.363 kb on - strand, within MMP_RS02575 at 482.378 kb on - strand, within MMP_RS02575 at 482.384 kb on - strand, within MMP_RS02575 at 482.384 kb on - strand, within MMP_RS02575 at 482.395 kb on + strand, within MMP_RS02575 at 482.405 kb on - strand at 482.439 kb on - strand at 482.443 kb on + strand at 482.449 kb on - strand at 482.450 kb on + strand at 482.505 kb on - strand at 482.512 kb on - strand at 482.544 kb on - strand at 482.677 kb on - strand at 482.756 kb on - strand at 482.756 kb on - strand at 482.756 kb on - strand at 482.757 kb on + strand at 482.757 kb on + strand at 482.757 kb on + strand at 482.757 kb on + strand at 482.757 kb on + strand at 482.758 kb on - strand at 482.758 kb on - strand at 482.758 kb on - strand at 482.759 kb on + strand at 482.760 kb on - strand at 482.760 kb on - strand at 482.760 kb on - strand at 482.760 kb on - strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.761 kb on + strand at 482.762 kb on - strand at 482.762 kb on - strand at 482.762 kb on - strand at 482.824 kb on + strand at 482.864 kb on - strand at 482.896 kb on - strand at 482.897 kb on + strand at 482.897 kb on + strand at 482.897 kb on + strand at 482.897 kb on + strand at 482.936 kb on - strand, within MMP_RS02580 at 482.937 kb on + strand, within MMP_RS02580 at 482.959 kb on + strand, within MMP_RS02580 at 483.026 kb on + strand, within MMP_RS02580 at 483.031 kb on - strand, within MMP_RS02580 at 483.032 kb on + strand, within MMP_RS02580 at 483.152 kb on - strand, within MMP_RS02580 at 483.168 kb on - strand, within MMP_RS02580 at 483.169 kb on + strand, within MMP_RS02580 at 483.279 kb on + strand at 483.284 kb on + strand at 483.297 kb on - strand at 483.320 kb on - strand at 483.358 kb on - strand at 483.359 kb on + strand at 483.361 kb on + strand at 483.363 kb on - strand at 483.364 kb on + strand at 483.413 kb on - strand at 483.436 kb on - strand at 483.436 kb on - strand at 483.436 kb on - strand at 483.437 kb on + strand at 483.450 kb on + strand at 483.451 kb on - strand at 483.451 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE remove 480,830 + MMP_RS02570 0.81 +3.8 480,834 + MMP_RS02570 0.81 -0.1 480,834 + MMP_RS02570 0.81 +0.3 480,838 - MMP_RS02570 0.81 +0.5 480,839 + MMP_RS02570 0.81 -0.4 480,868 + MMP_RS02570 0.83 -0.1 480,879 + MMP_RS02570 0.84 +0.0 480,879 + MMP_RS02570 0.84 +0.5 480,881 + MMP_RS02570 0.84 +0.1 480,932 - MMP_RS02570 0.87 -0.6 480,933 + MMP_RS02570 0.87 +0.0 481,109 - +0.6 481,114 - -0.1 481,114 - -0.0 481,114 - -0.1 481,115 + +0.7 481,178 - +0.4 481,178 - -0.5 481,198 - +0.2 481,198 - +0.3 481,199 + -0.2 481,199 + +0.1 481,260 + +0.5 481,262 + +0.7 481,295 + +0.1 481,308 - -0.1 481,309 + +0.0 481,309 + -0.2 481,311 + +0.1 481,459 - -0.0 481,482 - -0.3 481,482 - +0.0 481,482 - +0.1 481,483 + +0.4 481,529 - +0.4 481,529 - -0.1 481,530 + +0.2 481,530 + -0.2 481,604 - +0.5 481,613 - -0.0 481,690 + +1.0 481,737 + +0.3 481,784 - MMP_RS02575 0.14 -0.1 481,787 + MMP_RS02575 0.14 -0.4 481,838 - MMP_RS02575 0.21 +0.8 481,882 + MMP_RS02575 0.26 +3.9 481,958 - MMP_RS02575 0.35 +0.2 481,958 - MMP_RS02575 0.35 +0.4 481,962 + MMP_RS02575 0.36 +0.4 481,974 + MMP_RS02575 0.37 -0.1 482,070 + MMP_RS02575 0.49 +0.3 482,154 - MMP_RS02575 0.59 +0.1 482,157 + MMP_RS02575 0.60 +0.4 482,249 + MMP_RS02575 0.71 -0.9 482,255 - MMP_RS02575 0.72 +0.3 482,293 + MMP_RS02575 0.76 +0.5 482,363 - MMP_RS02575 0.85 -0.6 482,378 - MMP_RS02575 0.87 +0.2 482,384 - MMP_RS02575 0.88 +0.3 482,384 - MMP_RS02575 0.88 -0.1 482,395 + MMP_RS02575 0.89 +1.1 482,405 - +0.3 482,439 - +0.2 482,443 + +0.4 482,449 - +0.5 482,450 + +0.0 482,505 - +0.2 482,512 - +0.5 482,544 - +0.4 482,677 - +0.1 482,756 - +0.5 482,756 - +0.2 482,756 - +0.3 482,757 + -0.1 482,757 + +0.3 482,757 + +0.1 482,757 + -0.0 482,757 + +0.4 482,758 - +0.5 482,758 - +0.4 482,758 - +0.4 482,759 + -0.4 482,760 - +0.5 482,760 - +0.3 482,760 - +0.0 482,760 - +0.4 482,761 + +3.8 482,761 + +0.0 482,761 + +0.3 482,761 + +0.2 482,761 + -0.3 482,761 + +0.3 482,761 + -0.6 482,761 + +0.5 482,762 - -0.2 482,762 - +0.2 482,762 - +3.8 482,824 + +0.1 482,864 - -0.2 482,896 - -0.1 482,897 + +0.7 482,897 + +0.3 482,897 + -0.1 482,897 + -0.8 482,936 - MMP_RS02580 0.18 -0.5 482,937 + MMP_RS02580 0.18 -0.0 482,959 + MMP_RS02580 0.23 +0.4 483,026 + MMP_RS02580 0.38 +0.3 483,031 - MMP_RS02580 0.39 +0.5 483,032 + MMP_RS02580 0.40 -0.2 483,152 - MMP_RS02580 0.67 +0.2 483,168 - MMP_RS02580 0.71 -0.2 483,169 + MMP_RS02580 0.71 +0.5 483,279 + +0.1 483,284 + +0.6 483,297 - +0.4 483,320 - +0.1 483,358 - +0.3 483,359 + -0.1 483,361 + +0.8 483,363 - +0.5 483,364 + +0.3 483,413 - +0.5 483,436 - +0.3 483,436 - +0.4 483,436 - +0.4 483,437 + +0.4 483,450 + +0.1 483,451 - -0.5 483,451 - -0.7
Or see this region's nucleotide sequence