Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS18060

Experiment: R2A with m-arsenite 0.0390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with m-arsenite 0.0390625 mM
3,942,175	+		LRK54_RS18055	0.75	+0.9
3,942,175	+		LRK54_RS18055	0.75	+0.5
3,942,175	+		LRK54_RS18055	0.75	-0.3
3,942,175	+		LRK54_RS18055	0.75	-1.0
3,942,176	-		LRK54_RS18055	0.75	+0.1
3,942,176	-		LRK54_RS18055	0.75	+1.9
3,942,176	-		LRK54_RS18055	0.75	-0.5
3,942,176	-		LRK54_RS18055	0.75	-0.1
3,942,176	-		LRK54_RS18055	0.75	+0.1
3,942,200	-		LRK54_RS18055	0.78	-1.2
3,942,200	-		LRK54_RS18055	0.78	+0.5
3,942,200	-		LRK54_RS18055	0.78	+0.5
3,942,200	-		LRK54_RS18055	0.78	+1.7
3,942,250	+		LRK54_RS18055	0.83	+0.1
3,942,250	+		LRK54_RS18055	0.83	-1.1
3,942,250	+		LRK54_RS18055	0.83	+2.0
3,942,250	+		LRK54_RS18055	0.83	+0.1
3,942,250	+		LRK54_RS18055	0.83	-0.5
3,942,250	+		LRK54_RS18055	0.83	+0.3
3,942,250	+		LRK54_RS18055	0.83	+0.1
3,942,250	+		LRK54_RS18055	0.83	-1.9
3,942,250	+		LRK54_RS18055	0.83	+1.6
3,942,250	+		LRK54_RS18055	0.83	-0.5
3,942,250	+		LRK54_RS18055	0.83	+0.4
3,942,250	+		LRK54_RS18055	0.83	-0.2
3,942,250	+		LRK54_RS18055	0.83	+0.1
3,942,250	+		LRK54_RS18055	0.83	-0.3
3,942,250	+		LRK54_RS18055	0.83	-0.5
3,942,250	+		LRK54_RS18055	0.83	+0.9
3,942,250	+		LRK54_RS18055	0.83	-0.1
3,942,250	+		LRK54_RS18055	0.83	+0.1
3,942,250	+		LRK54_RS18055	0.83	+0.9
3,942,251	-		LRK54_RS18055	0.83	-1.7
3,942,251	-		LRK54_RS18055	0.83	+1.5
3,942,251	-				+1.5
3,942,251	-		LRK54_RS18055	0.83	-1.3
3,942,251	-		LRK54_RS18055	0.83	-0.5
3,942,251	-		LRK54_RS18055	0.83	+1.9
3,942,251	-		LRK54_RS18055	0.83	+0.2
3,942,251	-		LRK54_RS18055	0.83	-0.1
3,942,251	-		LRK54_RS18055	0.83	-0.1
3,942,251	-		LRK54_RS18055	0.83	-0.9
3,942,251	-		LRK54_RS18055	0.83	-0.7
3,942,251	-		LRK54_RS18055	0.83	-0.3
3,942,251	-		LRK54_RS18055	0.83	-0.5
3,942,251	-		LRK54_RS18055	0.83	+0.5
3,942,251	-		LRK54_RS18055	0.83	-0.7
3,942,252	+		LRK54_RS18055	0.83	-0.3
3,942,252	+		LRK54_RS18055	0.83	-1.1
3,942,253	-		LRK54_RS18055	0.83	-1.3
3,942,253	-		LRK54_RS18055	0.83	+0.5
3,942,253	-		LRK54_RS18055	0.83	+0.6
3,942,253	-		LRK54_RS18055	0.83	+2.5
3,942,327	+				+0.3
3,942,327	+				-0.1
3,942,327	+				-1.7
3,942,328	-				+0.5
3,942,328	-				+0.9
3,942,332	+				+0.1
3,942,333	-				+1.9
3,942,333	-				-0.1
3,942,340	+				+0.9
3,942,340	+				+0.1
3,942,340	+				+0.5
3,942,340	+				+1.5
3,942,341	-				-1.4
3,942,341	-				-0.3
3,942,341	-				+2.9
3,942,341	-				-1.4
3,942,424	+				+1.8
3,942,424	+				+1.7
3,942,424	+				-1.2
3,942,425	-				-2.0
3,942,425	-				-1.1
3,942,518	+				-1.0
3,942,518	+				+0.5
3,942,518	+				-1.2
3,942,519	-				+0.1
3,942,519	-				+0.1
3,942,519	-				-0.1
3,942,519	-				-0.1
3,942,556	-				-1.1
3,942,614	+		LRK54_RS18060	0.11	+0.5
3,942,614	+		LRK54_RS18060	0.11	-0.5
3,942,614	+		LRK54_RS18060	0.11	-1.2
3,942,614	+		LRK54_RS18060	0.11	+0.1
3,942,614	+		LRK54_RS18060	0.11	+1.9
3,942,614	+		LRK54_RS18060	0.11	-1.0
3,942,614	+		LRK54_RS18060	0.11	+0.1
3,942,614	+		LRK54_RS18060	0.11	+0.9
3,942,614	+		LRK54_RS18060	0.11	-0.1
3,942,614	+		LRK54_RS18060	0.11	+0.7
3,942,615	-		LRK54_RS18060	0.11	+1.5
3,942,615	-		LRK54_RS18060	0.11	+0.1
3,942,713	+		LRK54_RS18060	0.16	-0.7
3,942,713	+		LRK54_RS18060	0.16	+1.5
3,942,713	+		LRK54_RS18060	0.16	-1.9
3,942,713	+		LRK54_RS18060	0.16	-0.3
3,942,714	-		LRK54_RS18060	0.16	-0.3
3,942,732	+		LRK54_RS18060	0.17	-0.3
3,942,800	+		LRK54_RS18060	0.20	-1.0
3,942,923	+		LRK54_RS18060	0.27	+0.9
3,943,020	+		LRK54_RS18060	0.32	-0.3
3,943,020	+		LRK54_RS18060	0.32	+0.7
3,943,020	+		LRK54_RS18060	0.32	+1.1
3,943,020	+		LRK54_RS18060	0.32	-1.5
3,943,370	+		LRK54_RS18060	0.50	-1.4
3,943,370	+		LRK54_RS18060	0.50	+0.9
3,943,370	+		LRK54_RS18060	0.50	-1.7
3,943,370	+		LRK54_RS18060	0.50	+0.1
3,943,371	-		LRK54_RS18060	0.50	+1.5
3,943,371	-		LRK54_RS18060	0.50	-0.3
3,943,371	-		LRK54_RS18060	0.50	-0.9
3,943,517	+		LRK54_RS18060	0.58	+1.5
3,943,517	+		LRK54_RS18060	0.58	-0.5
3,943,518	-		LRK54_RS18060	0.58	+1.9
3,943,700	+		LRK54_RS18060	0.68	-1.2
3,943,700	+		LRK54_RS18060	0.68	-0.5
3,943,701	-		LRK54_RS18060	0.68	-0.1
3,943,701	-		LRK54_RS18060	0.68	+0.3
3,943,701	-		LRK54_RS18060	0.68	-1.7
3,943,701	-		LRK54_RS18060	0.68	-0.1
3,943,845	+		LRK54_RS18060	0.75	-0.1
3,943,854	-		LRK54_RS18060	0.76	-0.1
3,944,025	-		LRK54_RS18060	0.85	-1.2
3,944,025	-		LRK54_RS18060	0.85	-1.2
3,944,064	+		LRK54_RS18060	0.87	+0.1
3,944,064	+		LRK54_RS18060	0.87	+0.9
3,944,064	+		LRK54_RS18060	0.87	-0.9
3,944,065	-		LRK54_RS18060	0.87	-0.4
3,944,065	-		LRK54_RS18060	0.87	-0.5
3,944,065	-		LRK54_RS18060	0.87	+0.5
3,944,065	-		LRK54_RS18060	0.87	+0.5
3,944,065	-		LRK54_RS18060	0.87	+0.5
3,944,065	-		LRK54_RS18060	0.87	+0.9
3,944,065	-		LRK54_RS18060	0.87	+1.5
3,944,065	-		LRK54_RS18060	0.87	-0.1
3,944,065	-		LRK54_RS18060	0.87	-0.1
3,944,084	+		LRK54_RS18060	0.88	-0.3
3,944,191	+				+0.1
3,945,217	+				-0.7
3,945,217	+				+0.6
3,945,217	+				-1.2
3,945,217	+				-1.2
3,945,217	+				-0.8
3,945,217	+				-0.2
3,945,217	+				+0.5
3,945,217	+				+2.5
3,945,217	+				-0.7
3,945,217	+				-1.1
3,945,217	+				+0.7
3,945,217	+				-0.1
3,945,218	-				+0.1
3,945,218	-				-1.3
3,945,218	-				-0.5
3,945,218	-				+2.5
3,945,218	-				-0.2
3,945,218	-				-0.6
3,945,218	-				+0.3
3,945,218	-				+1.4
3,945,218	-				+0.9
3,945,218	-				+1.9
3,945,218	-				+0.0
3,945,218	-				-1.1
3,945,218	-				-0.5
3,945,218	-				-0.0
3,945,218	-				+1.1
3,945,218	-				-0.5
3,945,218	-				-0.5
3,945,218	-				-1.5
3,945,279	+				+0.2
3,945,279	+				+0.6
3,945,279	+				-0.1
3,945,279	+				+1.1
3,945,279	+				+0.5
3,945,279	+				-1.5
3,945,279	+				-0.5
3,945,279	+				-1.2
3,945,280	-				-0.3
3,945,280	-				-0.7
3,945,280	-				+1.0
3,945,280	-				-0.0
3,945,280	-				+0.5
3,945,280	-				+1.3
3,945,280	-				-0.7
3,945,280	-				-1.4
3,945,280	-				+0.9
3,945,280	-				+0.9
3,945,280	-				+0.9
3,945,286	+				+0.6
3,945,286	+				+0.9
3,945,286	+				+1.1
3,945,286	+				+1.2
3,945,286	+				-0.6
3,945,286	+				+0.8
3,945,286	+				-0.5
3,945,286	+				-0.0
3,945,286	+				-0.0
3,945,286	+				-0.1
3,945,286	+				+2.5
3,945,286	+				+0.7
3,945,286	+				+0.9
3,945,286	+				+1.1
3,945,286	+				-1.7
3,945,286	+				-0.0
3,945,286	+				-0.1
3,945,286	+				+0.6
3,945,286	+				-1.2
3,945,286	+				+2.0
3,945,286	+				+0.9
3,945,286	+				-0.7
3,945,286	+				+2.8
3,945,286	+				-0.1
3,945,286	+				-0.7
3,945,287	-				+0.3
3,945,287	-				+0.9
3,945,287	-				-0.4
3,945,287	-				+0.3
3,945,287	-				+0.0
3,945,287	-				-0.3
3,945,287	-				-0.9
3,945,287	-				+1.7
3,945,287	-				-1.2
3,945,287	-				+0.3
3,945,287	-				+0.2
3,945,287	-				+0.6
3,945,287	-				+0.3
3,945,287	-				+0.1
3,945,287	-				-1.5
3,945,287	-				-0.9
3,945,287	-				-0.7
3,945,287	-				+0.9
3,945,287	-				+1.0
3,945,287	-				+0.7
3,945,287	-				+0.7
3,945,287	-				+0.1
3,945,287	-				-0.7
3,945,287	-				-0.5
3,945,287	-				+0.7
3,945,289	+				-0.2
3,945,290	-				+1.1