Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10885

Experiment: R2A with m-arsenite 0.0390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with m-arsenite 0.0390625 mM
2,406,386	+		LRK54_RS10880	0.45	-1.5
2,406,387	-		LRK54_RS10880	0.45	-0.4
2,406,387	-		LRK54_RS10880	0.45	+0.1
2,406,464	+		LRK54_RS10880	0.51	-0.5
2,406,464	+		LRK54_RS10880	0.51	+0.2
2,406,464	+		LRK54_RS10880	0.51	-0.3
2,406,464	+		LRK54_RS10880	0.51	-0.1
2,406,465	-		LRK54_RS10880	0.51	+0.2
2,406,465	-		LRK54_RS10880	0.51	-0.3
2,406,465	-		LRK54_RS10880	0.51	-1.2
2,406,465	-		LRK54_RS10880	0.51	+0.2
2,406,465	-		LRK54_RS10880	0.51	+0.7
2,406,465	-		LRK54_RS10880	0.51	+0.4
2,406,465	-		LRK54_RS10880	0.51	-2.3
2,406,465	-		LRK54_RS10880	0.51	-0.2
2,406,465	-		LRK54_RS10880	0.51	+0.4
2,406,584	+		LRK54_RS10880	0.61	+0.4
2,406,584	+		LRK54_RS10880	0.61	-0.4
2,406,647	+		LRK54_RS10880	0.66	+1.0
2,406,647	+		LRK54_RS10880	0.66	+2.2
2,406,647	+		LRK54_RS10880	0.66	+0.1
2,406,647	+		LRK54_RS10880	0.66	-1.2
2,406,647	+		LRK54_RS10880	0.66	+0.4
2,406,647	+		LRK54_RS10880	0.66	+3.8
2,406,648	-		LRK54_RS10880	0.66	-0.3
2,406,648	-		LRK54_RS10880	0.66	+0.5
2,406,725	+		LRK54_RS10880	0.72	-0.2
2,406,725	+		LRK54_RS10880	0.72	+0.2
2,406,725	+		LRK54_RS10880	0.72	-0.5
2,406,725	+		LRK54_RS10880	0.72	+0.2
2,406,725	+		LRK54_RS10880	0.72	-0.6
2,406,726	-		LRK54_RS10880	0.73	-1.1
2,406,726	-		LRK54_RS10880	0.73	+0.8
2,406,726	-		LRK54_RS10880	0.73	+0.6
2,406,726	-		LRK54_RS10880	0.73	+0.6
2,406,756	+		LRK54_RS10880	0.75	-1.2
2,406,756	+		LRK54_RS10880	0.75	-0.6
2,406,756	+		LRK54_RS10880	0.75	+1.7
2,406,756	+		LRK54_RS10880	0.75	+0.9
2,406,757	-		LRK54_RS10880	0.75	-0.0
2,406,757	-		LRK54_RS10880	0.75	+0.4
2,406,757	-		LRK54_RS10880	0.75	-0.3
2,406,757	-		LRK54_RS10880	0.75	+2.2
2,406,758	+		LRK54_RS10880	0.75	-0.2
2,406,758	+		LRK54_RS10880	0.75	-1.3
2,406,758	+		LRK54_RS10880	0.75	-1.1
2,406,758	+		LRK54_RS10880	0.75	-1.2
2,406,758	+		LRK54_RS10880	0.75	-2.4
2,406,758	+		LRK54_RS10880	0.75	-1.1
2,406,758	+		LRK54_RS10880	0.75	-0.8
2,406,758	+		LRK54_RS10880	0.75	+0.7
2,406,758	+		LRK54_RS10880	0.75	-0.4
2,406,758	+		LRK54_RS10880	0.75	-0.5
2,406,758	+		LRK54_RS10880	0.75	-2.8
2,406,758	+		LRK54_RS10880	0.75	-0.6
2,406,758	+		LRK54_RS10880	0.75	+0.6
2,406,758	+		LRK54_RS10880	0.75	-0.0
2,406,758	+		LRK54_RS10880	0.75	-0.0
2,406,758	+		LRK54_RS10880	0.75	+2.3
2,406,758	+		LRK54_RS10880	0.75	+1.2
2,406,758	+		LRK54_RS10880	0.75	+0.1
2,406,758	+		LRK54_RS10880	0.75	-1.1
2,406,758	+		LRK54_RS10880	0.75	+0.6
2,406,758	+		LRK54_RS10880	0.75	+0.7
2,406,758	+		LRK54_RS10880	0.75	+3.2
2,406,758	+		LRK54_RS10880	0.75	-0.1
2,406,758	+		LRK54_RS10880	0.75	-1.0
2,406,758	+		LRK54_RS10880	0.75	+0.1
2,406,758	+		LRK54_RS10880	0.75	+0.2
2,406,758	+		LRK54_RS10880	0.75	+0.6
2,406,758	+		LRK54_RS10880	0.75	-0.5
2,406,759	-		LRK54_RS10880	0.75	+0.2
2,406,759	-		LRK54_RS10880	0.75	+1.2
2,406,759	-		LRK54_RS10880	0.75	-1.0
2,406,759	-		LRK54_RS10880	0.75	+0.3
2,406,759	-				+1.6
2,406,759	-		LRK54_RS10880	0.75	+0.2
2,406,759	-		LRK54_RS10880	0.75	+1.2
2,406,759	-		LRK54_RS10880	0.75	+0.7
2,406,759	-		LRK54_RS10880	0.75	-2.2
2,406,759	-		LRK54_RS10880	0.75	-0.9
2,406,759	-		LRK54_RS10880	0.75	-1.3
2,406,759	-		LRK54_RS10880	0.75	-0.6
2,406,759	-		LRK54_RS10880	0.75	+0.7
2,406,759	-		LRK54_RS10880	0.75	-0.8
2,406,759	-		LRK54_RS10880	0.75	+0.6
2,406,759	-		LRK54_RS10880	0.75	+0.6
2,406,759	-		LRK54_RS10880	0.75	-0.4
2,406,759	-		LRK54_RS10880	0.75	+0.1
2,406,759	-		LRK54_RS10880	0.75	-2.1
2,406,759	-		LRK54_RS10880	0.75	-0.2
2,406,759	-		LRK54_RS10880	0.75	+0.2
2,406,759	-		LRK54_RS10880	0.75	+2.2
2,406,759	-		LRK54_RS10880	0.75	+0.5
2,406,759	-		LRK54_RS10880	0.75	+0.2
2,406,759	-		LRK54_RS10880	0.75	+0.2
2,406,759	-		LRK54_RS10880	0.75	+0.1
2,406,827	+		LRK54_RS10880	0.81	-0.9
2,406,828	-		LRK54_RS10880	0.81	-0.3
2,406,828	-		LRK54_RS10880	0.81	+0.6
2,406,911	+		LRK54_RS10880	0.88	+0.4
2,406,911	+		LRK54_RS10880	0.88	-0.3
2,406,911	+		LRK54_RS10880	0.88	-0.2
2,406,911	+		LRK54_RS10880	0.88	-1.3
2,406,911	+		LRK54_RS10880	0.88	-0.7
2,406,911	+		LRK54_RS10880	0.88	+0.5
2,406,911	+		LRK54_RS10880	0.88	-0.1
2,406,911	+		LRK54_RS10880	0.88	+0.0
2,406,911	+		LRK54_RS10880	0.88	-0.6
2,406,911	+		LRK54_RS10880	0.88	+0.3
2,406,911	+		LRK54_RS10880	0.88	+0.3
2,406,911	+		LRK54_RS10880	0.88	-0.0
2,406,911	+		LRK54_RS10880	0.88	-1.2
2,406,911	+		LRK54_RS10880	0.88	+0.6
2,406,911	+		LRK54_RS10880	0.88	+0.2
2,406,911	+		LRK54_RS10880	0.88	-1.4
2,406,911	+		LRK54_RS10880	0.88	-0.6
2,406,911	+		LRK54_RS10880	0.88	-2.7
2,406,911	+		LRK54_RS10880	0.88	-0.1
2,406,911	+		LRK54_RS10880	0.88	+0.9
2,406,911	+		LRK54_RS10880	0.88	-0.8
2,406,911	+		LRK54_RS10880	0.88	-0.5
2,406,911	+		LRK54_RS10880	0.88	-0.7
2,406,911	+		LRK54_RS10880	0.88	-0.2
2,406,911	+		LRK54_RS10880	0.88	-1.5
2,406,911	+		LRK54_RS10880	0.88	-1.0
2,406,911	+		LRK54_RS10880	0.88	-0.5
2,406,911	+		LRK54_RS10880	0.88	-0.1
2,406,911	+		LRK54_RS10880	0.88	-0.1
2,406,911	+		LRK54_RS10880	0.88	+0.1
2,406,911	+		LRK54_RS10880	0.88	-0.5
2,406,911	+		LRK54_RS10880	0.88	-0.3
2,406,911	+		LRK54_RS10880	0.88	-0.2
2,406,911	+		LRK54_RS10880	0.88	+0.5
2,406,911	+		LRK54_RS10880	0.88	+1.0
2,406,911	+		LRK54_RS10880	0.88	-0.3
2,406,912	-		LRK54_RS10880	0.88	-0.8
2,406,912	-		LRK54_RS10880	0.88	+1.6
2,406,912	-		LRK54_RS10880	0.88	-0.5
2,406,912	-		LRK54_RS10880	0.88	-0.4
2,406,912	-		LRK54_RS10880	0.88	+0.5
2,406,912	-		LRK54_RS10880	0.88	-0.2
2,406,912	-		LRK54_RS10880	0.88	-0.1
2,406,912	-		LRK54_RS10880	0.88	-0.1
2,406,912	-		LRK54_RS10880	0.88	-0.4
2,406,912	-		LRK54_RS10880	0.88	-0.8
2,406,912	-		LRK54_RS10880	0.88	-2.3
2,406,912	-		LRK54_RS10880	0.88	+0.2
2,406,912	-		LRK54_RS10880	0.88	+0.2
2,406,912	-		LRK54_RS10880	0.88	-1.2
2,406,912	-		LRK54_RS10880	0.88	+0.4
2,406,912	-		LRK54_RS10880	0.88	-0.7
2,406,912	-		LRK54_RS10880	0.88	+1.4
2,406,912	-		LRK54_RS10880	0.88	-1.8
2,406,912	-		LRK54_RS10880	0.88	-0.8
2,406,912	-		LRK54_RS10880	0.88	+0.2
2,406,912	-		LRK54_RS10880	0.88	+0.6
2,406,912	-		LRK54_RS10880	0.88	-0.4
2,406,912	-		LRK54_RS10880	0.88	-1.4
2,406,912	-		LRK54_RS10880	0.88	-0.1
2,406,912	-		LRK54_RS10880	0.88	-1.2
2,406,912	-		LRK54_RS10880	0.88	+0.6
2,406,912	-		LRK54_RS10880	0.88	+2.5
2,406,912	-		LRK54_RS10880	0.88	-1.3
2,406,912	-		LRK54_RS10880	0.88	-0.3
2,406,912	-		LRK54_RS10880	0.88	-2.7
2,406,912	-		LRK54_RS10880	0.88	+0.0
2,406,912	-		LRK54_RS10880	0.88	+0.6
2,406,912	-		LRK54_RS10880	0.88	+0.0
2,406,912	-		LRK54_RS10880	0.88	-0.6
2,406,912	-		LRK54_RS10880	0.88	-2.8
2,406,912	-		LRK54_RS10880	0.88	-0.6
2,406,912	-		LRK54_RS10880	0.88	-0.3
2,406,912	-		LRK54_RS10880	0.88	-0.5
2,406,912	-		LRK54_RS10880	0.88	+0.1
2,406,912	-		LRK54_RS10880	0.88	+1.9
2,406,912	-		LRK54_RS10880	0.88	-0.7
2,406,912	-		LRK54_RS10880	0.88	+0.2
2,406,913	-		LRK54_RS10880	0.88	-1.8
2,407,062	+				+1.4
2,407,062	+				-0.8
2,407,062	+				+0.3
2,407,062	+				-0.5
2,407,062	+				-0.0
2,407,062	+				-0.3
2,407,062	+				-1.0
2,407,062	+				-0.6
2,407,062	+				-0.1
2,407,062	+				-1.3
2,407,062	+				-0.2
2,407,062	+				-0.1
2,407,062	+				+1.0
2,407,062	+				-2.1
2,407,062	+				-1.1
2,407,062	+				+0.4
2,407,063	-				+0.6
2,407,063	-				+0.2
2,407,063	-				-0.1
2,407,063	-				-0.5
2,407,063	-				+0.0
2,407,063	-				-0.6
2,407,063	-				-1.3
2,407,063	-				+2.4
2,407,063	-				-0.1
2,407,063	-				+0.9
2,407,063	-				+2.6
2,407,063	-				+0.9
2,407,063	-				-0.1
2,407,063	-				-1.0
2,407,063	-				-0.1
2,407,063	-				-0.9
2,407,092	-				-0.0
2,407,111	-				+1.5
2,407,311	+		LRK54_RS10885	0.20	-1.4
2,407,311	+		LRK54_RS10885	0.20	-0.1
2,407,311	+		LRK54_RS10885	0.20	-1.4
2,407,311	+		LRK54_RS10885	0.20	-3.8
2,407,311	+		LRK54_RS10885	0.20	-1.6
2,407,311	+		LRK54_RS10885	0.20	-3.1
2,407,311	+		LRK54_RS10885	0.20	-3.6
2,407,311	+		LRK54_RS10885	0.20	-1.4
2,407,312	-		LRK54_RS10885	0.20	+0.2
2,407,312	-		LRK54_RS10885	0.20	-1.0
2,407,312	-		LRK54_RS10885	0.20	-2.3
2,407,312	-		LRK54_RS10885	0.20	-1.3
2,407,491	+		LRK54_RS10885	0.38	-2.7
2,407,491	+		LRK54_RS10885	0.38	-1.0
2,407,491	+		LRK54_RS10885	0.38	+0.5
2,407,491	+		LRK54_RS10885	0.38	-1.7
2,407,492	-		LRK54_RS10885	0.38	-2.2
2,407,492	-		LRK54_RS10885	0.38	-3.1
2,407,492	-		LRK54_RS10885	0.38	-2.3
2,407,492	-		LRK54_RS10885	0.38	-3.3
2,407,492	-		LRK54_RS10885	0.38	-1.9
2,407,545	+		LRK54_RS10885	0.43	-0.9
2,407,545	+		LRK54_RS10885	0.43	-0.8
2,407,545	+		LRK54_RS10885	0.43	-1.7
2,407,545	+		LRK54_RS10885	0.43	-2.1
2,407,545	+		LRK54_RS10885	0.43	-1.0
2,407,546	-		LRK54_RS10885	0.43	-0.9
2,407,546	-		LRK54_RS10885	0.43	-2.8
2,407,546	-		LRK54_RS10885	0.43	+0.8
2,407,546	-		LRK54_RS10885	0.43	-2.0
2,407,546	-		LRK54_RS10885	0.43	-2.8
2,407,546	-		LRK54_RS10885	0.43	-2.9
2,407,546	-		LRK54_RS10885	0.43	-0.8
2,407,546	-		LRK54_RS10885	0.43	-3.8
2,407,546	-		LRK54_RS10885	0.43	-1.5
2,407,546	-		LRK54_RS10885	0.43	-3.3
2,407,546	-		LRK54_RS10885	0.43	-1.0
2,407,546	-		LRK54_RS10885	0.43	-1.4
2,407,560	+		LRK54_RS10885	0.44	-1.0
2,407,560	+		LRK54_RS10885	0.44	-1.4
2,407,560	+		LRK54_RS10885	0.44	-1.5
2,407,560	+		LRK54_RS10885	0.44	-2.5
2,407,560	+		LRK54_RS10885	0.44	-3.1
2,407,560	+		LRK54_RS10885	0.44	-1.7
2,407,560	+		LRK54_RS10885	0.44	-0.9
2,407,560	+		LRK54_RS10885	0.44	-3.6
2,407,560	+		LRK54_RS10885	0.44	-1.1
2,407,560	+		LRK54_RS10885	0.44	-0.6
2,407,561	-		LRK54_RS10885	0.44	-0.1
2,407,561	-		LRK54_RS10885	0.44	-2.9
2,407,561	-		LRK54_RS10885	0.44	+1.2
2,407,561	-		LRK54_RS10885	0.44	-0.8
2,407,561	-		LRK54_RS10885	0.44	-2.7
2,407,561	-		LRK54_RS10885	0.44	-3.1
2,407,561	-		LRK54_RS10885	0.44	-1.8
2,407,561	-		LRK54_RS10885	0.44	-1.9
2,407,561	-		LRK54_RS10885	0.44	-2.7
2,407,821	+		LRK54_RS10885	0.70	-2.3
2,407,821	+		LRK54_RS10885	0.70	+2.2
2,407,821	+		LRK54_RS10885	0.70	-1.7
2,407,821	+		LRK54_RS10885	0.70	-2.0
2,407,821	+		LRK54_RS10885	0.70	-1.5
2,407,821	+		LRK54_RS10885	0.70	-0.8
2,407,821	+		LRK54_RS10885	0.70	-2.1
2,407,821	+		LRK54_RS10885	0.70	-2.1
2,407,821	+		LRK54_RS10885	0.70	-1.8
2,407,821	+		LRK54_RS10885	0.70	-1.7
2,407,821	+		LRK54_RS10885	0.70	-1.8
2,407,821	+		LRK54_RS10885	0.70	-2.6
2,407,821	+		LRK54_RS10885	0.70	-0.6
2,407,821	+		LRK54_RS10885	0.70	-0.8
2,407,822	-		LRK54_RS10885	0.70	-0.1
2,407,822	-		LRK54_RS10885	0.70	-3.9
2,407,822	-		LRK54_RS10885	0.70	-0.3
2,407,822	-		LRK54_RS10885	0.70	-0.8
2,407,822	-		LRK54_RS10885	0.70	-0.6
2,407,822	-		LRK54_RS10885	0.70	-3.1
2,407,822	-		LRK54_RS10885	0.70	+0.4
2,407,822	-		LRK54_RS10885	0.70	-2.0
2,407,822	-		LRK54_RS10885	0.70	-1.6
2,407,822	-		LRK54_RS10885	0.70	-1.5
2,407,822	-		LRK54_RS10885	0.70	-3.3
2,407,822	-		LRK54_RS10885	0.70	-1.3
2,407,937	+		LRK54_RS10885	0.81	-1.1
2,407,937	+		LRK54_RS10885	0.81	-0.6
2,407,937	+		LRK54_RS10885	0.81	-1.8
2,407,937	+		LRK54_RS10885	0.81	-2.4
2,407,937	+		LRK54_RS10885	0.81	-0.4
2,407,937	+		LRK54_RS10885	0.81	-1.8
2,407,937	+		LRK54_RS10885	0.81	-2.7
2,407,937	+		LRK54_RS10885	0.81	-2.2
2,407,937	+		LRK54_RS10885	0.81	-2.0
2,407,937	+		LRK54_RS10885	0.81	-2.3
2,407,938	-		LRK54_RS10885	0.82	-1.7
2,407,938	-		LRK54_RS10885	0.82	+1.8
2,407,938	-		LRK54_RS10885	0.82	-1.1
2,407,938	-		LRK54_RS10885	0.82	-1.5
2,407,938	-		LRK54_RS10885	0.82	+1.6
2,407,938	-		LRK54_RS10885	0.82	-0.6
2,407,938	-		LRK54_RS10885	0.82	+0.4
2,407,938	-		LRK54_RS10885	0.82	-2.6
2,407,938	-		LRK54_RS10885	0.82	-1.8
2,407,938	-		LRK54_RS10885	0.82	-1.0
2,407,962	+		LRK54_RS10885	0.84	-1.4
2,407,962	+		LRK54_RS10885	0.84	-0.1
2,407,962	+		LRK54_RS10885	0.84	-0.0
2,407,962	+		LRK54_RS10885	0.84	-2.1
2,407,962	+		LRK54_RS10885	0.84	-1.1
2,407,962	+				+0.6
2,407,962	+		LRK54_RS10885	0.84	-0.6
2,407,962	+		LRK54_RS10885	0.84	-1.4
2,407,962	+		LRK54_RS10885	0.84	+1.2
2,407,962	+		LRK54_RS10885	0.84	-2.2
2,407,962	+		LRK54_RS10885	0.84	-2.6
2,407,962	+		LRK54_RS10885	0.84	-1.8
2,407,962	+		LRK54_RS10885	0.84	-1.5
2,407,962	+		LRK54_RS10885	0.84	-2.8
2,407,963	-		LRK54_RS10885	0.84	-1.2
2,407,963	-		LRK54_RS10885	0.84	-2.1
2,407,963	-		LRK54_RS10885	0.84	-1.1
2,407,963	-		LRK54_RS10885	0.84	-1.0
2,407,963	-		LRK54_RS10885	0.84	-0.4
2,407,963	-		LRK54_RS10885	0.84	-2.1
2,407,963	-		LRK54_RS10885	0.84	-0.6
2,407,963	-		LRK54_RS10885	0.84	-3.4
2,407,963	-		LRK54_RS10885	0.84	-3.3
2,407,963	-		LRK54_RS10885	0.84	-1.4
2,407,963	-		LRK54_RS10885	0.84	-1.5
2,408,175	+				-1.4
2,408,175	+				-0.5
2,408,175	+				-2.9
2,408,175	+				-1.8
2,408,175	+				-0.9
2,408,175	+				-1.8
2,408,175	+				-1.0
2,408,175	+				-1.4
2,408,176	-				-0.2
2,408,176	-				+1.3
2,408,176	-				+0.2
2,408,176	-				+0.3
2,408,176	-				-0.2
2,408,176	-				-0.7
2,408,176	-				-0.5
2,408,176	-				-1.9
2,408,176	-				-0.8
2,408,204	+				-0.1
2,408,204	+				+0.9
2,408,204	+				-0.3
2,408,205	-				-0.5
2,408,205	-				+0.2
2,408,205	-				-1.8
2,408,205	-				-0.3
2,408,205	-				+1.4
2,408,205	-				-0.5