Experiment: R2A with m-arsenite 0.0390625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS02265 and LRK54_RS02270 overlap by 4 nucleotides LRK54_RS02270 and LRK54_RS02275 are separated by 120 nucleotides LRK54_RS02275 and LRK54_RS02280 are separated by 93 nucleotides
LRK54_RS02265: LRK54_RS02265 - ferrous iron transporter B, at 493,893 to 495,728
_RS02265
LRK54_RS02270: LRK54_RS02270 - ferrous iron transport protein A, at 495,725 to 495,970
_RS02270
LRK54_RS02275: LRK54_RS02275 - enoyl-CoA hydratase-related protein, at 496,091 to 496,888
_RS02275
LRK54_RS02280: LRK54_RS02280 - ATP-grasp domain-containing protein, at 496,982 to 498,973
_RS02280
Position (kb) 496
497 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 495.270 kb on + strand, within LRK54_RS02265 at 495.478 kb on + strand, within LRK54_RS02265 at 495.478 kb on + strand, within LRK54_RS02265 at 495.478 kb on + strand, within LRK54_RS02265 at 495.479 kb on - strand, within LRK54_RS02265 at 495.479 kb on - strand, within LRK54_RS02265 at 495.479 kb on - strand, within LRK54_RS02265 at 495.479 kb on - strand, within LRK54_RS02265 at 495.538 kb on + strand, within LRK54_RS02265 at 495.538 kb on + strand, within LRK54_RS02265 at 495.538 kb on + strand, within LRK54_RS02265 at 495.538 kb on + strand, within LRK54_RS02265 at 495.538 kb on + strand, within LRK54_RS02265 at 495.539 kb on - strand, within LRK54_RS02265 at 495.539 kb on - strand, within LRK54_RS02265 at 495.539 kb on - strand, within LRK54_RS02265 at 495.539 kb on - strand, within LRK54_RS02265 at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.625 kb on + strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.626 kb on - strand at 495.987 kb on + strand at 495.988 kb on - strand at 495.988 kb on - strand at 495.993 kb on + strand at 495.993 kb on + strand at 495.993 kb on + strand at 495.993 kb on + strand at 495.993 kb on + strand at 495.993 kb on + strand at 495.994 kb on - strand at 495.994 kb on - strand at 495.994 kb on - strand at 496.005 kb on + strand at 496.005 kb on + strand at 496.005 kb on + strand at 496.006 kb on - strand at 496.059 kb on + strand at 496.059 kb on + strand at 496.059 kb on + strand at 496.059 kb on + strand at 496.059 kb on + strand at 496.059 kb on + strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.060 kb on - strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.070 kb on + strand at 496.071 kb on - strand at 496.071 kb on - strand at 496.071 kb on - strand at 496.071 kb on - strand at 496.071 kb on - strand at 496.419 kb on - strand, within LRK54_RS02275 at 496.419 kb on - strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.532 kb on + strand, within LRK54_RS02275 at 496.533 kb on - strand, within LRK54_RS02275 at 496.533 kb on - strand, within LRK54_RS02275 at 496.533 kb on - strand, within LRK54_RS02275 at 496.533 kb on - strand, within LRK54_RS02275 at 496.533 kb on - strand, within LRK54_RS02275 at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.886 kb on + strand at 496.887 kb on + strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.887 kb on - strand at 496.935 kb on + strand at 496.935 kb on + strand at 496.936 kb on - strand at 496.936 kb on - strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.944 kb on + strand at 496.945 kb on - strand at 496.945 kb on - strand at 496.945 kb on - strand at 496.995 kb on + strand at 496.995 kb on + strand at 496.995 kb on + strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 496.996 kb on - strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.075 kb on + strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.076 kb on - strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.159 kb on + strand at 497.160 kb on - strand at 497.160 kb on - strand at 497.160 kb on - strand at 497.160 kb on - strand at 497.160 kb on - strand at 497.160 kb on - strand at 497.225 kb on + strand, within LRK54_RS02280 at 497.225 kb on + strand, within LRK54_RS02280 at 497.225 kb on + strand, within LRK54_RS02280 at 497.225 kb on + strand, within LRK54_RS02280 at 497.226 kb on - strand, within LRK54_RS02280 at 497.365 kb on - strand, within LRK54_RS02280 at 497.381 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.585 kb on + strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.586 kb on - strand, within LRK54_RS02280 at 497.783 kb on + strand, within LRK54_RS02280 at 497.783 kb on + strand, within LRK54_RS02280 at 497.783 kb on + strand, within LRK54_RS02280 at 497.783 kb on + strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280 at 497.784 kb on - strand, within LRK54_RS02280
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with m-arsenite 0.0390625 mM remove 495,270 + LRK54_RS02265 0.75 +0.7 495,478 + LRK54_RS02265 0.86 +1.3 495,478 + LRK54_RS02265 0.86 -1.5 495,478 + LRK54_RS02265 0.86 -0.3 495,479 - LRK54_RS02265 0.86 +0.9 495,479 - LRK54_RS02265 0.86 +1.9 495,479 - LRK54_RS02265 0.86 -0.0 495,479 - LRK54_RS02265 0.86 -0.2 495,538 + LRK54_RS02265 0.90 +0.8 495,538 + LRK54_RS02265 0.90 -0.7 495,538 + LRK54_RS02265 0.90 -1.2 495,538 + LRK54_RS02265 0.90 +0.6 495,538 + LRK54_RS02265 0.90 -1.3 495,539 - LRK54_RS02265 0.90 -0.3 495,539 - LRK54_RS02265 0.90 +0.8 495,539 - LRK54_RS02265 0.90 -0.2 495,539 - LRK54_RS02265 0.90 +0.1 495,625 + -0.7 495,625 + -0.4 495,625 + +0.7 495,625 + -0.8 495,625 + -0.6 495,625 + -0.0 495,625 + -0.9 495,625 + -2.3 495,625 + -0.3 495,625 + -2.1 495,625 + -1.0 495,625 + -1.2 495,625 + -0.2 495,625 + -1.2 495,625 + +0.3 495,625 + -1.7 495,625 + +0.0 495,625 + +0.3 495,625 + +0.2 495,625 + +0.5 495,626 - -1.0 495,626 - -0.1 495,626 - +0.4 495,626 - +0.1 495,626 - +0.5 495,626 - -0.7 495,626 - -0.5 495,626 - -0.7 495,626 - +0.7 495,626 - -1.0 495,626 - +0.6 495,626 - -0.9 495,626 - +0.8 495,626 - -0.4 495,626 - +1.3 495,626 - +0.2 495,626 - +0.3 495,987 + +0.8 495,988 - -0.8 495,988 - +1.9 495,993 + -0.9 495,993 + -0.6 495,993 + +0.3 495,993 + +1.3 495,993 + +1.0 495,993 + -0.8 495,994 - -0.3 495,994 - +0.4 495,994 - +0.2 496,005 + -0.5 496,005 + -1.0 496,005 + +1.7 496,006 - -0.7 496,059 + +1.1 496,059 + +0.8 496,059 + +0.7 496,059 + +0.3 496,059 + -0.0 496,059 + +0.4 496,060 - -0.0 496,060 - -0.9 496,060 - -0.1 496,060 - -0.8 496,060 - -1.3 496,060 - +0.1 496,060 - -1.2 496,060 - -0.2 496,060 - -0.5 496,060 - -2.2 496,060 - -0.9 496,060 - +2.9 496,070 + +1.7 496,070 + +0.5 496,070 + +2.0 496,070 + +1.2 496,070 + -0.6 496,070 + -0.3 496,070 + +3.3 496,071 - -0.0 496,071 - -0.7 496,071 - +0.5 496,071 - -0.0 496,071 - -0.0 496,419 - LRK54_RS02275 0.41 -1.2 496,419 - LRK54_RS02275 0.41 -0.7 496,532 + LRK54_RS02275 0.55 -1.2 496,532 + LRK54_RS02275 0.55 -2.5 496,532 + LRK54_RS02275 0.55 -2.4 496,532 + LRK54_RS02275 0.55 -0.9 496,532 + LRK54_RS02275 0.55 -1.9 496,532 + LRK54_RS02275 0.55 -2.3 496,532 + LRK54_RS02275 0.55 -1.4 496,533 - LRK54_RS02275 0.55 -2.6 496,533 - LRK54_RS02275 0.55 +1.9 496,533 - LRK54_RS02275 0.55 -2.0 496,533 - LRK54_RS02275 0.55 -2.1 496,533 - LRK54_RS02275 0.55 +1.3 496,886 + +0.4 496,886 + +0.1 496,886 + -0.2 496,886 + +1.7 496,886 + -0.5 496,886 + +0.0 496,886 + -0.6 496,886 + -1.1 496,886 + -1.0 496,886 + -0.4 496,886 + -0.6 496,886 + -0.2 496,886 + -0.7 496,886 + -0.8 496,886 + +0.8 496,886 + -0.0 496,886 + -0.0 496,886 + +0.7 496,886 + -0.4 496,886 + +2.1 496,886 + -0.7 496,886 + -1.0 496,886 + +0.1 496,886 + -2.5 496,886 + +0.8 496,886 + -0.7 496,886 + -0.6 496,886 + -0.0 496,886 + +1.4 496,886 + -0.1 496,886 + +1.3 496,886 + -0.9 496,886 + +0.1 496,886 + -0.9 496,886 + +0.5 496,886 + +0.5 496,886 + +1.6 496,886 + +0.3 496,886 + -0.1 496,886 + +0.0 496,886 + -0.6 496,886 + +0.7 496,886 + -0.7 496,886 + -0.6 496,886 + -0.5 496,886 + +0.9 496,886 + -0.3 496,886 + +0.5 496,886 + +1.8 496,886 + -0.7 496,886 + +0.3 496,886 + -0.5 496,886 + +0.9 496,886 + -0.6 496,886 + -0.2 496,886 + -0.5 496,886 + -1.0 496,886 + +1.8 496,886 + -0.9 496,887 + -0.2 496,887 - +1.0 496,887 - -0.5 496,887 - +0.1 496,887 - +0.5 496,887 - -0.6 496,887 - -1.8 496,887 - -0.1 496,887 - -0.4 496,887 - -2.0 496,887 - -0.9 496,887 - -0.5 496,887 - +0.5 496,887 - +0.1 496,887 - +0.2 496,887 - +0.0 496,887 - +1.1 496,887 - -0.0 496,887 - +0.6 496,887 - +0.6 496,887 - +0.0 496,887 - +0.5 496,887 - +0.9 496,887 - -0.3 496,887 - -0.4 496,887 - +0.3 496,887 - -0.4 496,887 - +1.3 496,887 - -2.7 496,887 - +0.4 496,887 - -0.9 496,887 - +0.2 496,887 - -0.4 496,887 - +1.5 496,887 - +0.4 496,887 - -1.8 496,887 - -1.1 496,887 - +1.7 496,887 - +0.3 496,887 - +1.4 496,887 - +0.2 496,887 - -1.3 496,887 - +0.7 496,887 - +0.3 496,887 - -0.8 496,887 - -1.1 496,887 - -2.3 496,887 - +0.2 496,887 - +0.7 496,887 - +0.1 496,887 - -0.1 496,887 - +0.7 496,887 - -0.5 496,887 - -0.1 496,887 - +0.9 496,887 - +0.4 496,887 - -1.3 496,887 - +0.4 496,887 - -1.3 496,887 - -0.7 496,935 + +1.5 496,935 + -0.8 496,936 - +0.5 496,936 - -0.5 496,944 + +0.1 496,944 + +0.6 496,944 + -0.2 496,944 + -0.0 496,944 + -1.0 496,944 + -1.0 496,944 + +0.2 496,944 + +0.6 496,944 + -0.4 496,945 - -1.0 496,945 - +1.0 496,945 - -2.3 496,995 + -0.0 496,995 + -1.1 496,995 + +0.3 496,996 - +0.1 496,996 - -0.7 496,996 - -1.1 496,996 - -0.9 496,996 - +0.3 496,996 - +0.1 496,996 - +0.3 496,996 - -1.6 497,075 + -0.9 497,075 + -0.6 497,075 + -0.3 497,075 + +1.7 497,075 + -0.4 497,075 + -0.6 497,075 + -0.9 497,075 + -0.8 497,076 - +0.4 497,076 - -0.4 497,076 - -0.0 497,076 - +0.6 497,076 - -0.5 497,076 - +1.0 497,076 - +0.6 497,159 + -1.9 497,159 + +0.3 497,159 + +0.3 497,159 + -0.8 497,159 + -1.1 497,159 + -0.7 497,159 + -2.0 497,160 - -0.4 497,160 - +0.7 497,160 - +0.7 497,160 - -0.0 497,160 - -1.7 497,160 - -0.8 497,225 + LRK54_RS02280 0.12 -0.4 497,225 + LRK54_RS02280 0.12 +0.7 497,225 + LRK54_RS02280 0.12 +0.8 497,225 + LRK54_RS02280 0.12 -0.8 497,226 - LRK54_RS02280 0.12 -0.5 497,365 - LRK54_RS02280 0.19 -0.6 497,381 + LRK54_RS02280 0.20 -1.5 497,585 + LRK54_RS02280 0.30 -0.4 497,585 + LRK54_RS02280 0.30 -0.7 497,585 + LRK54_RS02280 0.30 +1.0 497,585 + LRK54_RS02280 0.30 -3.3 497,585 + LRK54_RS02280 0.30 +0.6 497,585 + LRK54_RS02280 0.30 -1.5 497,585 + LRK54_RS02280 0.30 +0.3 497,585 + LRK54_RS02280 0.30 -1.0 497,585 + LRK54_RS02280 0.30 +1.3 497,586 - LRK54_RS02280 0.30 +0.1 497,586 - LRK54_RS02280 0.30 +1.7 497,586 - LRK54_RS02280 0.30 +0.5 497,586 - LRK54_RS02280 0.30 +0.1 497,586 - LRK54_RS02280 0.30 +0.7 497,586 - LRK54_RS02280 0.30 +0.8 497,586 - LRK54_RS02280 0.30 -1.0 497,586 - LRK54_RS02280 0.30 -0.2 497,586 - LRK54_RS02280 0.30 -0.2 497,783 + LRK54_RS02280 0.40 +1.1 497,783 + LRK54_RS02280 0.40 -0.9 497,783 + LRK54_RS02280 0.40 -0.2 497,783 + LRK54_RS02280 0.40 +0.7 497,784 - LRK54_RS02280 0.40 -0.0 497,784 - LRK54_RS02280 0.40 +0.6 497,784 - LRK54_RS02280 0.40 -0.0 497,784 - LRK54_RS02280 0.40 +0.1 497,784 - LRK54_RS02280 0.40 -0.8 497,784 - LRK54_RS02280 0.40 -1.5 497,784 - LRK54_RS02280 0.40 -0.2 497,784 - LRK54_RS02280 0.40 -0.0 497,784 - LRK54_RS02280 0.40 +1.1 497,784 - LRK54_RS02280 0.40 +0.6
Or see this region's nucleotide sequence