Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25330

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
6,157,526	+		CA265_RS25325	0.15	+0.1
6,157,527	-		CA265_RS25325	0.15	+1.9
6,157,527	-		CA265_RS25325	0.15	+0.2
6,157,527	-		CA265_RS25325	0.15	+0.2
6,157,529	-		CA265_RS25325	0.15	+0.0
6,157,529	-		CA265_RS25325	0.15	-0.7
6,157,529	-		CA265_RS25325	0.15	+0.3
6,157,558	+		CA265_RS25325	0.18	-0.6
6,157,559	-		CA265_RS25325	0.18	-0.2
6,157,634	+		CA265_RS25325	0.24	-0.7
6,157,635	-		CA265_RS25325	0.24	-1.6
6,157,646	+		CA265_RS25325	0.25	+0.5
6,157,647	-		CA265_RS25325	0.25	+0.4
6,157,714	+		CA265_RS25325	0.31	-0.6
6,157,732	-		CA265_RS25325	0.32	+0.6
6,157,781	-		CA265_RS25325	0.37	-1.0
6,157,784	+		CA265_RS25325	0.37	-0.5
6,157,829	-		CA265_RS25325	0.41	-0.3
6,157,884	+		CA265_RS25325	0.45	+0.4
6,157,884	+		CA265_RS25325	0.45	+0.2
6,157,898	+		CA265_RS25325	0.47	+0.4
6,157,974	-		CA265_RS25325	0.53	+0.0
6,157,974	-		CA265_RS25325	0.53	+0.7
6,158,006	+		CA265_RS25325	0.56	-1.0
6,158,006	+		CA265_RS25325	0.56	-0.6
6,158,015	+		CA265_RS25325	0.57	+0.3
6,158,038	-		CA265_RS25325	0.59	+1.4
6,158,059	+		CA265_RS25325	0.60	+0.2
6,158,085	+		CA265_RS25325	0.62	-0.7
6,158,093	+		CA265_RS25325	0.63	-0.5
6,158,128	+		CA265_RS25325	0.66	-1.3
6,158,135	-		CA265_RS25325	0.67	-0.7
6,158,170	+		CA265_RS25325	0.70	+0.3
6,158,203	+		CA265_RS25325	0.73	+1.1
6,158,206	+		CA265_RS25325	0.73	+0.6
6,158,275	-		CA265_RS25325	0.79	+0.5
6,158,280	+		CA265_RS25325	0.79	+0.8
6,158,281	-		CA265_RS25325	0.79	+0.5
6,158,348	-		CA265_RS25325	0.85	-0.4
6,158,421	-				-0.1
6,158,424	-				-0.4
6,158,444	+				+0.5
6,158,456	+				-0.1
6,158,510	+				-0.3
6,158,511	-				-0.3
6,158,512	+				+0.6
6,158,579	+		CA265_RS25330	0.14	-0.6
6,158,775	-		CA265_RS25330	0.56	-2.0
6,158,816	+		CA265_RS25330	0.65	-1.2
6,158,901	-		CA265_RS25330	0.84	-0.5
6,159,007	+				-0.3
6,159,055	+				-0.9
6,159,170	+				+0.9
6,159,170	+				+0.0
6,159,170	+				-0.4
6,159,170	+				+0.2
6,159,171	-				-0.1
6,159,200	+		CA265_RS25335	0.12	-0.2
6,159,445	+				+1.0
6,159,460	+				-1.0
6,159,470	-				-0.2
6,159,483	+				+0.2
6,159,484	-				-0.4
6,159,577	-				+0.1
6,159,697	+		CA265_RS25340	0.18	+0.2
6,159,716	+		CA265_RS25340	0.20	+0.6
6,159,717	-		CA265_RS25340	0.20	+0.6
6,159,737	-		CA265_RS25340	0.21	+1.3
6,159,780	+		CA265_RS25340	0.24	+0.1
6,159,780	+		CA265_RS25340	0.24	-0.1
6,159,802	+		CA265_RS25340	0.26	-0.0
6,159,807	+		CA265_RS25340	0.26	+0.6
6,159,839	-		CA265_RS25340	0.28	-0.0
6,159,888	+		CA265_RS25340	0.32	+0.1
6,159,962	-		CA265_RS25340	0.37	+0.3