Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS23030

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
5,639,928	-				-0.1
5,639,954	-				-0.3
5,640,005	-				-1.7
5,640,126	+				-1.2
5,640,146	-				-1.3
5,640,165	-				-1.7
5,640,190	+				+0.0
5,640,193	-				-2.6
5,640,194	+				-1.1
5,640,194	+				-0.2
5,640,195	-				-2.1
5,640,227	+				+0.0
5,640,250	+				+0.4
5,640,275	+				+0.9
5,640,277	+				-1.3
5,640,277	+				+0.4
5,640,477	-		CA265_RS23030	0.13	-0.3
5,640,650	-		CA265_RS23030	0.24	-2.0
5,640,650	-		CA265_RS23030	0.24	-2.5
5,640,792	-		CA265_RS23030	0.33	-0.3
5,640,797	+		CA265_RS23030	0.33	-2.6
5,640,874	-		CA265_RS23030	0.38	-0.6
5,641,208	-		CA265_RS23030	0.60	-2.8
5,641,490	-		CA265_RS23030	0.78	-1.3
5,641,496	+		CA265_RS23030	0.78	-0.6
5,641,571	+				-0.6
5,641,637	+		CA265_RS23030	0.87	-0.6
5,641,674	+		CA265_RS23030	0.90	+0.8
5,641,694	+				-1.4
5,641,754	+				-0.9
5,641,810	+				-0.3
5,641,816	+				-0.6
5,641,816	+				-0.6
5,641,817	-				-2.2
5,641,817	-				+0.2
5,641,817	-				-0.8
5,641,835	-				-1.2
5,641,853	+				+0.6
5,642,037	+		CA265_RS23035	0.41	-0.0
5,642,042	-		CA265_RS23035	0.42	-0.3
5,642,042	-		CA265_RS23035	0.42	-0.4
5,642,096	+		CA265_RS23035	0.58	-0.5
5,642,097	-		CA265_RS23035	0.58	+1.0
5,642,221	+				-0.3
5,642,222	-				-0.6
5,642,262	-				-1.1
5,642,274	+				+0.2
5,642,378	-				+0.5
5,642,386	-				-0.7
5,642,400	+				+1.7
5,642,442	+				+0.2
5,642,484	-				-0.6
5,642,572	+				+0.0
5,642,580	+				-0.1
5,642,580	+				+0.4
5,642,650	-		CA265_RS23040	0.15	+1.7
5,642,659	+		CA265_RS23040	0.17	+0.5
5,642,659	+		CA265_RS23040	0.17	+0.1
5,642,659	+		CA265_RS23040	0.17	+0.3
5,642,660	-		CA265_RS23040	0.17	-0.3
5,642,663	+		CA265_RS23040	0.18	-0.8
5,642,692	-		CA265_RS23040	0.24	+1.7
5,642,692	-		CA265_RS23040	0.24	-0.1
5,642,692	-		CA265_RS23040	0.24	+0.3
5,642,777	+		CA265_RS23040	0.40	+0.6
5,642,812	+		CA265_RS23040	0.47	+0.2