Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22900

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
5,608,645	+				+1.4
5,608,678	-				-0.7
5,608,683	+				-0.2
5,608,695	+				+0.3
5,608,906	+		CA265_RS22895	0.37	-1.2
5,608,907	-		CA265_RS22895	0.37	-0.2
5,608,940	+		CA265_RS22895	0.42	-0.2
5,608,983	-		CA265_RS22895	0.50	-0.8
5,609,073	-		CA265_RS22895	0.65	+0.0
5,609,087	-		CA265_RS22895	0.67	-2.1
5,609,152	-		CA265_RS22895	0.78	+1.0
5,609,163	+		CA265_RS22895	0.80	-2.1
5,609,187	-		CA265_RS22895	0.84	+0.3
5,609,202	-		CA265_RS22895	0.86	+0.4
5,609,272	-				-0.4
5,609,363	+				+0.7
5,609,364	-				-0.2
5,609,368	-				-0.6
5,609,368	-				-0.1
5,609,370	-				+0.2
5,609,407	-				-0.0
5,609,629	-		CA265_RS22900	0.14	+0.2
5,609,714	+		CA265_RS22900	0.25	+0.8
5,609,751	+		CA265_RS22900	0.30	-0.2
5,609,752	-		CA265_RS22900	0.30	-2.2
5,609,850	-		CA265_RS22900	0.43	-1.4
5,609,874	-		CA265_RS22900	0.46	+0.8
5,609,944	+		CA265_RS22900	0.55	-1.2
5,610,182	+		CA265_RS22900	0.85	+1.8
5,610,295	+				-0.9
5,610,296	-				+0.3
5,610,296	-				-0.5
5,610,316	+				+0.8
5,610,362	-				+1.6
5,610,385	+				-0.3
5,610,456	+				-0.2
5,610,508	-				+0.6
5,610,529	+				+1.0
5,610,636	+				+0.1
5,610,742	+				+0.9
5,610,742	+				-0.8
5,610,764	-		CA265_RS22905	0.10	-0.5
5,610,859	+		CA265_RS22905	0.18	+1.8
5,611,142	-		CA265_RS22905	0.42	-0.2
5,611,265	-		CA265_RS22905	0.53	+1.5