Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21870

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
5,372,702	-		CA265_RS21865	0.59	+0.7
5,372,731	-		CA265_RS21865	0.61	+0.4
5,372,736	-		CA265_RS21865	0.61	+0.1
5,372,898	-		CA265_RS21865	0.70	-0.2
5,372,945	-		CA265_RS21865	0.73	-0.2
5,373,074	-		CA265_RS21865	0.80	-0.7
5,373,074	-		CA265_RS21865	0.80	-0.1
5,373,116	-		CA265_RS21865	0.82	+0.2
5,373,122	-		CA265_RS21865	0.82	+0.4
5,373,131	-		CA265_RS21865	0.83	+0.8
5,373,159	-		CA265_RS21865	0.85	-1.9
5,373,192	-		CA265_RS21865	0.86	-0.7
5,373,267	-				+0.7
5,373,311	-				-0.6
5,373,311	-				-0.8
5,373,360	-				-0.7
5,373,360	-				+0.4
5,373,430	+				-2.8
5,373,450	-				+0.6
5,373,463	-				-0.1
5,373,482	+				-0.3
5,373,524	-				-0.1
5,373,602	+				-0.0
5,373,603	-				+0.1
5,373,669	+				-0.7
5,373,733	+				-0.8
5,373,762	-		CA265_RS21870	0.12	-2.0
5,373,765	-		CA265_RS21870	0.13	-2.3
5,373,805	-		CA265_RS21870	0.19	-1.2
5,373,826	-		CA265_RS21870	0.22	-1.5
5,373,846	+		CA265_RS21870	0.24	-0.2
5,373,847	-		CA265_RS21870	0.25	-4.2
5,373,973	+		CA265_RS21870	0.43	-1.9
5,373,974	-		CA265_RS21870	0.43	-1.8
5,373,975	+		CA265_RS21870	0.43	-2.4
5,373,995	+		CA265_RS21870	0.46	-1.4
5,373,996	-		CA265_RS21870	0.46	-0.7
5,373,996	-		CA265_RS21870	0.46	-0.6
5,374,007	+		CA265_RS21870	0.48	-1.2
5,374,054	-		CA265_RS21870	0.54	-0.2
5,374,097	-		CA265_RS21870	0.60	-0.4
5,374,111	-		CA265_RS21870	0.62	-1.8
5,374,126	-		CA265_RS21870	0.65	+0.8
5,374,181	+		CA265_RS21870	0.73	-2.8
5,374,249	-		CA265_RS21870	0.82	-0.3
5,374,270	-		CA265_RS21870	0.85	-1.2
5,374,296	+		CA265_RS21870	0.89	-0.9
5,374,297	-		CA265_RS21870	0.89	-2.6
5,374,297	-		CA265_RS21870	0.89	-0.8
5,374,352	-				-0.9
5,374,352	-				-3.6
5,374,354	-				-3.2
5,374,467	+				-0.5
5,374,468	-				+0.8
5,374,514	-				-1.0
5,374,514	-				-0.1
5,374,515	+				-0.3
5,374,517	+				+0.5