Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20195

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,990,451	-		CA265_RS20190	0.38	-1.3
4,990,460	+		CA265_RS20190	0.38	-0.5
4,990,498	-		CA265_RS20190	0.42	+0.3
4,990,519	-		CA265_RS20190	0.44	+0.0
4,990,542	+		CA265_RS20190	0.46	-0.1
4,990,546	+		CA265_RS20190	0.47	-0.4
4,990,547	-		CA265_RS20190	0.47	+0.5
4,990,569	-		CA265_RS20190	0.49	+0.1
4,990,569	-		CA265_RS20190	0.49	+0.6
4,990,571	-		CA265_RS20190	0.49	-0.4
4,990,626	+		CA265_RS20190	0.54	-0.8
4,990,683	+		CA265_RS20190	0.60	+0.3
4,990,822	+		CA265_RS20190	0.73	-0.1
4,990,838	-		CA265_RS20190	0.75	+0.2
4,990,852	+		CA265_RS20190	0.76	-0.9
4,990,927	+		CA265_RS20190	0.83	-1.4
4,991,075	+				+0.1
4,991,075	+				-0.4
4,991,075	+				+0.5
4,991,075	+				+0.4
4,991,075	+				+0.3
4,991,075	+				+1.6
4,991,075	+				+0.3
4,991,193	-				-0.2
4,991,326	-				+1.2
4,991,344	+				-0.5
4,991,348	+				+0.6
4,991,393	-				+0.8
4,991,519	-		CA265_RS20195	0.30	-0.8
4,991,540	+		CA265_RS20195	0.34	+0.0
4,991,561	-		CA265_RS20195	0.38	-2.1
4,991,561	-		CA265_RS20195	0.38	+2.4
4,991,836	+		CA265_RS20195	0.87	-1.2
4,991,864	+				-0.4
4,991,909	+				-0.2
4,991,988	-				-0.2
4,991,991	-				-1.0
4,991,995	+				+1.2
4,992,077	-				-0.9
4,992,077	-				+1.6
4,992,078	+				+0.1
4,992,222	+		CA265_RS20200	0.27	+0.0
4,992,351	+		CA265_RS20200	0.52	+0.2
4,992,352	-		CA265_RS20200	0.52	+0.8
4,992,384	+		CA265_RS20200	0.59	+0.2
4,992,407	-		CA265_RS20200	0.63	-2.0
4,992,598	+				-0.6
4,992,606	+				+0.6
4,992,611	+				+0.4
4,992,615	+				+0.0
4,992,616	-				+0.8
4,992,656	+				-0.2
4,992,657	-				+0.5
4,992,682	-				+0.8
4,992,691	-				+0.3
4,992,691	-				-0.9
4,992,802	-				+0.1
4,992,840	+				+0.3
4,992,845	+				+0.6