Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19315

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,795,414	+		CA265_RS19310	0.61	-0.6
4,795,449	-		CA265_RS19310	0.63	-1.0
4,795,581	-		CA265_RS19310	0.68	-1.2
4,795,600	+		CA265_RS19310	0.69	-1.9
4,795,633	+		CA265_RS19310	0.71	-3.4
4,795,638	-		CA265_RS19310	0.71	-1.0
4,795,645	+		CA265_RS19310	0.71	-0.6
4,795,645	+		CA265_RS19310	0.71	-0.8
4,795,649	-		CA265_RS19310	0.71	-1.9
4,795,711	+		CA265_RS19310	0.74	-2.2
4,795,716	+		CA265_RS19310	0.74	-1.6
4,795,726	+		CA265_RS19310	0.75	-1.6
4,795,766	+		CA265_RS19310	0.76	-0.4
4,795,786	+		CA265_RS19310	0.77	-3.5
4,795,862	+		CA265_RS19310	0.80	-3.7
4,795,889	-		CA265_RS19310	0.82	-1.1
4,795,967	+		CA265_RS19310	0.85	-1.2
4,795,967	+		CA265_RS19310	0.85	-1.2
4,795,967	+		CA265_RS19310	0.85	-0.8
4,796,053	+		CA265_RS19310	0.89	-2.4
4,796,168	-				-1.0
4,796,169	+				-2.7
4,796,179	-				-1.0
4,796,181	-				+0.2
4,796,183	-				-0.8
4,796,238	-				-0.8
4,796,314	+				-1.3
4,796,315	-				-1.8
4,796,335	-				+0.1
4,796,435	-		CA265_RS19315	0.13	+0.4
4,796,448	+		CA265_RS19315	0.14	-0.6
4,796,452	+		CA265_RS19315	0.15	-1.6
4,796,506	+		CA265_RS19315	0.21	-3.3
4,796,642	-		CA265_RS19315	0.38	+0.2
4,796,683	+		CA265_RS19315	0.43	-2.9
4,796,705	+		CA265_RS19315	0.46	-1.3
4,796,706	-		CA265_RS19315	0.46	-1.3
4,796,706	-		CA265_RS19315	0.46	-1.7
4,796,763	+		CA265_RS19315	0.53	-0.0
4,796,767	+		CA265_RS19315	0.54	-1.9
4,796,855	+		CA265_RS19315	0.65	-0.7
4,796,869	+		CA265_RS19315	0.66	+0.2
4,796,884	+		CA265_RS19315	0.68	-3.2
4,796,947	+		CA265_RS19315	0.76	-3.2
4,797,016	+		CA265_RS19315	0.85	-2.5
4,797,016	+		CA265_RS19315	0.85	-0.8
4,797,052	+		CA265_RS19315	0.89	-1.5
4,797,124	+				-1.3
4,797,133	+				-3.4
4,797,145	+				-2.2
4,797,146	-				-1.6
4,797,146	-				-0.3
4,797,159	+				-1.9
4,797,167	+				-0.7
4,797,168	-				-0.4
4,797,168	-				+0.6
4,797,200	-				-0.2
4,797,213	-				-0.5
4,797,213	-				-0.7
4,797,242	+				+0.3
4,797,242	+				-0.6
4,797,243	-				+0.4
4,797,247	+				-0.0
4,797,247	+				-0.9
4,797,306	+				+0.1
4,797,348	-				-0.8
4,797,528	-		CA265_RS19320	0.29	+1.8
4,797,682	+		CA265_RS19320	0.50	+0.2
4,797,758	+		CA265_RS19320	0.60	+0.2
4,797,789	+		CA265_RS19320	0.65	+0.2
4,797,790	-		CA265_RS19320	0.65	-1.6
4,797,876	-		CA265_RS19320	0.76	-1.4
4,797,975	+		CA265_RS19320	0.90	-1.1
4,797,980	+				-1.7
4,798,052	+				-2.8
4,798,052	+				-2.5
4,798,053	-				+0.9
4,798,076	-				+0.2
4,798,078	-				+0.4
4,798,130	+				-1.0
4,798,135	-				+0.3
4,798,137	-				+0.3
4,798,139	-				+0.1