Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19275

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,785,722	+		CA265_RS19270	0.10	-1.6
4,785,749	+		CA265_RS19270	0.13	-3.4
4,785,814	-		CA265_RS19270	0.19	-2.4
4,785,849	-		CA265_RS19270	0.22	-2.4
4,786,014	+		CA265_RS19270	0.38	-1.3
4,786,020	+		CA265_RS19270	0.38	-3.9
4,786,021	-		CA265_RS19270	0.38	-2.1
4,786,083	-		CA265_RS19270	0.44	-1.2
4,786,083	-		CA265_RS19270	0.44	-0.6
4,786,087	-		CA265_RS19270	0.45	-0.2
4,786,090	-		CA265_RS19270	0.45	-0.4
4,786,164	+		CA265_RS19270	0.52	-2.5
4,786,165	-		CA265_RS19270	0.52	-1.1
4,786,187	+		CA265_RS19270	0.54	-0.8
4,786,217	+		CA265_RS19270	0.57	-3.3
4,786,218	-		CA265_RS19270	0.57	-1.1
4,786,298	+		CA265_RS19270	0.64	-3.6
4,786,314	+		CA265_RS19270	0.66	-2.2
4,786,344	-		CA265_RS19270	0.69	-1.4
4,786,347	+		CA265_RS19270	0.69	-2.5
4,786,348	-		CA265_RS19270	0.69	-1.1
4,786,389	-		CA265_RS19270	0.73	-2.1
4,786,396	+		CA265_RS19270	0.74	-2.9
4,786,450	-		CA265_RS19270	0.79	-1.1
4,786,458	-		CA265_RS19270	0.79	-0.2
4,786,458	-		CA265_RS19270	0.79	-2.3
4,786,518	-		CA265_RS19270	0.85	-1.6
4,786,522	-		CA265_RS19270	0.85	+0.8
4,786,550	+		CA265_RS19270	0.88	+0.3
4,786,551	-		CA265_RS19270	0.88	-1.2
4,786,551	-		CA265_RS19270	0.88	-2.3
4,786,600	-				+1.3
4,786,611	+				-2.5
4,786,677	-				-2.2
4,786,726	+				-1.0
4,786,785	+		CA265_RS19275	0.11	+0.2
4,787,032	+		CA265_RS19275	0.50	-1.8
4,787,080	+		CA265_RS19275	0.58	-1.2
4,787,106	+		CA265_RS19275	0.62	-0.2
4,787,321	+				-1.4
4,787,322	-				-0.2
4,787,344	+				-3.4
4,787,346	+				-0.1
4,787,542	+		CA265_RS19280	0.16	-0.6
4,787,727	+		CA265_RS19280	0.30	-1.2
4,787,802	+		CA265_RS19280	0.36	-1.7
4,787,802	+		CA265_RS19280	0.36	-1.4
4,787,802	+		CA265_RS19280	0.36	-2.4
4,787,877	+		CA265_RS19280	0.42	-1.7
4,787,946	+		CA265_RS19280	0.47	+1.0
4,788,224	-		CA265_RS19280	0.68	-1.0