Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19260

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,783,397	-		CA265_RS19255	0.29	-0.2
4,783,423	+		CA265_RS19255	0.32	-0.5
4,783,484	+		CA265_RS19255	0.37	-1.2
4,783,516	+		CA265_RS19255	0.40	-1.4
4,783,516	+		CA265_RS19255	0.40	-2.1
4,783,658	+		CA265_RS19255	0.52	-2.0
4,783,821	-		CA265_RS19255	0.67	-1.2
4,783,948	+		CA265_RS19255	0.78	-0.8
4,783,956	-		CA265_RS19255	0.79	-1.6
4,784,112	+				-0.2
4,784,112	+				+0.8
4,784,130	+				+0.2
4,784,172	+				-2.2
4,784,221	-				-0.6
4,784,230	+				-1.2
4,784,240	-				-0.2
4,784,240	-				+0.8
4,784,398	-		CA265_RS19260	0.26	-4.2
4,784,421	+		CA265_RS19260	0.29	-1.2
4,784,427	-		CA265_RS19260	0.30	-2.3
4,784,427	-		CA265_RS19260	0.30	-0.7
4,784,544	-		CA265_RS19260	0.45	-0.3
4,784,575	-		CA265_RS19260	0.49	-1.2
4,784,640	+		CA265_RS19260	0.58	-1.4
4,784,712	-		CA265_RS19260	0.67	-1.7
4,784,764	-		CA265_RS19260	0.74	-0.6
4,784,765	+		CA265_RS19260	0.74	-1.2
4,784,766	-		CA265_RS19260	0.74	-1.9
4,784,879	-		CA265_RS19260	0.89	-2.4
4,784,945	+				-1.2
4,784,968	-				-2.2
4,785,150	+		CA265_RS19265	0.30	-1.1
4,785,175	-		CA265_RS19265	0.34	-1.9
4,785,188	+		CA265_RS19265	0.36	-0.2
4,785,189	-		CA265_RS19265	0.36	-1.4
4,785,373	-		CA265_RS19265	0.66	-0.6
4,785,450	+		CA265_RS19265	0.78	-2.7
4,785,524	+		CA265_RS19265	0.90	-1.7
4,785,568	+				-2.2
4,785,571	-				-2.0
4,785,613	+				-1.6
4,785,684	+				-1.6
4,785,722	+		CA265_RS19270	0.10	-1.6
4,785,749	+		CA265_RS19270	0.13	-3.4
4,785,814	-		CA265_RS19270	0.19	-2.4
4,785,849	-		CA265_RS19270	0.22	-2.4