Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19025

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,733,201	+				-0.1
4,733,264	+				+1.3
4,733,265	-				-1.3
4,733,296	-		CA265_RS19025	0.12	-0.9
4,733,296	-		CA265_RS19025	0.12	-3.1
4,733,349	-		CA265_RS19025	0.16	-1.9
4,733,369	-		CA265_RS19025	0.18	+0.5
4,733,411	-		CA265_RS19025	0.21	-3.2
4,733,411	-		CA265_RS19025	0.21	-0.6
4,733,453	-		CA265_RS19025	0.24	-0.9
4,733,501	+		CA265_RS19025	0.28	-1.9
4,733,502	-		CA265_RS19025	0.28	-0.9
4,733,561	-		CA265_RS19025	0.33	-0.4
4,733,600	-		CA265_RS19025	0.36	-0.6
4,733,612	-		CA265_RS19025	0.37	-2.6
4,733,612	-		CA265_RS19025	0.37	+1.1
4,733,616	-		CA265_RS19025	0.37	-0.3
4,733,779	+		CA265_RS19025	0.49	-0.4
4,733,846	-		CA265_RS19025	0.55	-0.5
4,733,851	+		CA265_RS19025	0.55	-1.7
4,733,906	-		CA265_RS19025	0.59	+0.1
4,733,914	+		CA265_RS19025	0.60	-0.6
4,733,953	+		CA265_RS19025	0.63	+0.1
4,733,964	+		CA265_RS19025	0.64	+0.3
4,733,992	+		CA265_RS19025	0.66	-3.6
4,734,003	-		CA265_RS19025	0.67	-2.6
4,734,112	-		CA265_RS19025	0.75	-0.1
4,734,153	-		CA265_RS19025	0.78	+1.7
4,734,153	-		CA265_RS19025	0.78	-0.6
4,734,266	+		CA265_RS19025	0.87	-2.9
4,734,269	-		CA265_RS19025	0.87	+0.5
4,734,269	-		CA265_RS19025	0.87	-0.4
4,734,332	+				+0.0
4,734,333	-				+0.6
4,734,335	-				+0.7
4,734,559	+				+1.1
4,734,563	+				+0.4
4,734,564	-				+0.6
4,734,565	+				+1.8
4,734,565	+				+0.3
4,734,565	+				+0.2
4,734,566	-				-0.4
4,734,570	+				-0.6
4,734,570	+				-0.6
4,734,574	+				-0.3
4,734,605	+				+0.1
4,734,625	+				-0.2
4,734,652	-				-1.2
4,734,697	+				-0.1
4,734,751	-		CA265_RS19030	0.17	+0.0
4,734,757	+		CA265_RS19030	0.17	+0.3
4,734,788	+		CA265_RS19030	0.21	-0.4
4,734,794	-		CA265_RS19030	0.22	+0.3
4,734,924	+		CA265_RS19030	0.39	-0.1
4,734,924	+		CA265_RS19030	0.39	+0.3
4,734,924	+		CA265_RS19030	0.39	+0.6
4,734,982	+		CA265_RS19030	0.46	+0.7
4,734,982	+		CA265_RS19030	0.46	-0.7
4,734,983	-		CA265_RS19030	0.46	-0.3
4,734,983	-		CA265_RS19030	0.46	-0.9
4,734,991	-		CA265_RS19030	0.47	+0.2
4,735,029	+		CA265_RS19030	0.52	+0.4
4,735,081	-		CA265_RS19030	0.58	-0.1
4,735,124	-		CA265_RS19030	0.64	-0.4
4,735,181	-		CA265_RS19030	0.71	+0.3
4,735,208	-		CA265_RS19030	0.74	-2.8
4,735,237	-		CA265_RS19030	0.78	-0.3
4,735,290	+		CA265_RS19030	0.85	+0.3
4,735,290	+		CA265_RS19030	0.85	-1.2
4,735,348	-				-0.1
4,735,427	+				+1.2
4,735,428	-				+0.2