Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17455

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,352,829	+		CA265_RS17450	0.47	-0.1
4,352,829	+		CA265_RS17450	0.47	+0.5
4,352,888	-				-0.1
4,352,911	-		CA265_RS17450	0.51	-1.7
4,352,927	-		CA265_RS17450	0.52	-1.4
4,352,960	-		CA265_RS17450	0.54	-0.1
4,353,018	+				-1.1
4,353,028	+		CA265_RS17450	0.57	+1.0
4,353,086	-		CA265_RS17450	0.60	-0.2
4,353,127	-		CA265_RS17450	0.63	+0.0
4,353,177	+		CA265_RS17450	0.65	+0.1
4,353,177	+		CA265_RS17450	0.65	-0.4
4,353,178	-		CA265_RS17450	0.65	-1.6
4,353,199	+		CA265_RS17450	0.67	-0.2
4,353,222	+		CA265_RS17450	0.68	-0.2
4,353,256	-		CA265_RS17450	0.70	+0.4
4,353,294	+		CA265_RS17450	0.72	-0.4
4,353,295	-		CA265_RS17450	0.72	+0.5
4,353,297	-		CA265_RS17450	0.72	-2.0
4,353,343	+		CA265_RS17450	0.74	-0.2
4,353,405	-		CA265_RS17450	0.78	+0.9
4,353,408	+		CA265_RS17450	0.78	+0.8
4,353,408	+		CA265_RS17450	0.78	-0.2
4,353,408	+		CA265_RS17450	0.78	+0.4
4,353,409	-		CA265_RS17450	0.78	-0.9
4,353,448	+		CA265_RS17450	0.80	+0.1
4,353,448	+		CA265_RS17450	0.80	-0.3
4,353,467	+		CA265_RS17450	0.81	+1.2
4,353,467	+		CA265_RS17450	0.81	-0.1
4,353,524	+		CA265_RS17450	0.84	-0.1
4,353,525	-		CA265_RS17450	0.84	-0.3
4,353,525	-		CA265_RS17450	0.84	+0.2
4,353,567	+		CA265_RS17450	0.86	-0.1
4,353,658	-				-0.8
4,353,659	+				+1.5
4,353,669	+				-0.4
4,353,689	-				-0.1
4,353,689	-				-1.5
4,353,766	+				+0.2
4,353,766	+				-0.4
4,353,770	-				-0.7
4,353,802	-				-0.0
4,353,813	+				-0.6
4,353,814	-				-0.6
4,353,831	+				+0.0
4,353,970	-		CA265_RS17455	0.15	-1.1
4,354,052	+		CA265_RS17455	0.24	-1.8
4,354,181	-		CA265_RS17455	0.37	-0.8
4,354,254	+		CA265_RS17455	0.45	-3.1
4,354,255	-		CA265_RS17455	0.45	-1.2
4,354,255	-		CA265_RS17455	0.45	-0.8
4,354,260	+		CA265_RS17455	0.46	-2.3
4,354,467	-		CA265_RS17455	0.67	-1.0
4,354,475	-		CA265_RS17455	0.68	+0.1
4,354,530	-		CA265_RS17455	0.74	-0.8
4,354,618	-				+0.9
4,354,648	+		CA265_RS17455	0.86	-0.5
4,354,648	+		CA265_RS17455	0.86	+1.0
4,354,714	-				-1.0
4,354,776	+				-2.3
4,354,833	-				-0.1
4,354,883	-		CA265_RS17460	0.18	+0.1
4,355,158	+		CA265_RS17460	0.66	-0.2
4,355,187	-		CA265_RS17460	0.72	+1.3
4,355,234	+		CA265_RS17460	0.80	+0.6
4,355,234	+		CA265_RS17460	0.80	+0.1
4,355,248	-		CA265_RS17460	0.82	-0.0
4,355,300	-				+0.1
4,355,459	+				-0.1
4,355,459	+				+0.3
4,355,479	-		CA265_RS17465	0.10	+0.2
4,355,502	+		CA265_RS17465	0.13	+0.3
4,355,535	+		CA265_RS17465	0.17	+0.3
4,355,535	+		CA265_RS17465	0.17	+0.2
4,355,536	-		CA265_RS17465	0.18	+0.4
4,355,565	+		CA265_RS17465	0.21	+0.0
4,355,625	-		CA265_RS17465	0.29	-0.1
4,355,631	+		CA265_RS17465	0.30	-0.2
4,355,658	-		CA265_RS17465	0.33	-1.1
4,355,658	-		CA265_RS17465	0.33	-1.1
4,355,669	+		CA265_RS17465	0.34	+0.2
4,355,731	+		CA265_RS17465	0.42	+0.2