Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14740

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
3,712,802	+		CA265_RS14735	0.45	+0.1
3,712,802	+		CA265_RS14735	0.45	-1.6
3,712,948	+		CA265_RS14735	0.54	+0.9
3,713,031	+		CA265_RS14735	0.58	-0.9
3,713,072	-		CA265_RS14735	0.61	-0.4
3,713,190	-		CA265_RS14735	0.68	-0.2
3,713,227	+		CA265_RS14735	0.70	+0.7
3,713,232	+		CA265_RS14735	0.70	-1.4
3,713,329	+		CA265_RS14735	0.76	-0.5
3,713,330	-		CA265_RS14735	0.76	+0.5
3,713,330	-		CA265_RS14735	0.76	+0.6
3,713,336	+		CA265_RS14735	0.76	-0.0
3,713,351	-		CA265_RS14735	0.77	-0.3
3,713,446	+		CA265_RS14735	0.83	-0.1
3,713,447	-		CA265_RS14735	0.83	-0.6
3,713,499	+		CA265_RS14735	0.86	-0.0
3,713,541	+		CA265_RS14735	0.89	+1.2
3,713,542	+		CA265_RS14735	0.89	-0.3
3,713,543	-		CA265_RS14735	0.89	-1.3
3,713,615	-				-0.1
3,713,618	+				-1.2
3,713,618	+				-0.3
3,713,618	+				-0.8
3,713,618	+				-0.0
3,713,664	-				+0.4
3,713,920	-		CA265_RS14740	0.27	-0.7
3,713,920	-		CA265_RS14740	0.27	-0.7
3,713,920	-		CA265_RS14740	0.27	-0.6
3,713,976	-		CA265_RS14740	0.35	+0.3
3,713,976	-		CA265_RS14740	0.35	+0.3
3,713,978	-		CA265_RS14740	0.35	-0.2
3,714,025	+		CA265_RS14740	0.42	-1.0
3,714,149	-		CA265_RS14740	0.59	-0.7
3,714,154	-		CA265_RS14740	0.60	-1.6
3,714,215	-		CA265_RS14740	0.69	-0.3
3,714,217	+		CA265_RS14740	0.69	-0.2
3,714,279	+		CA265_RS14740	0.78	-0.4
3,714,280	-		CA265_RS14740	0.78	+0.2
3,714,281	+		CA265_RS14740	0.78	+0.9
3,714,313	-		CA265_RS14740	0.82	-0.4
3,714,336	+		CA265_RS14740	0.86	-1.4
3,714,336	+		CA265_RS14740	0.86	+0.6
3,714,337	-		CA265_RS14740	0.86	-0.8
3,714,337	-		CA265_RS14740	0.86	-0.8
3,714,337	-		CA265_RS14740	0.86	-0.7
3,714,337	-		CA265_RS14740	0.86	-0.0
3,714,379	+				-2.1
3,714,474	-				-0.2
3,714,477	+		CA265_RS14745	0.10	-0.8
3,714,478	-		CA265_RS14745	0.10	-0.9
3,714,543	-		CA265_RS14745	0.27	+0.1
3,714,615	+		CA265_RS14745	0.45	+0.3
3,714,720	+		CA265_RS14745	0.71	-0.1
3,714,740	+		CA265_RS14745	0.76	-1.2
3,714,741	-		CA265_RS14745	0.76	-0.3
3,714,860	-				+0.5
3,714,879	+				-1.0
3,714,977	-		CA265_RS14750	0.17	-0.2
3,714,989	+		CA265_RS14750	0.18	-1.5
3,714,998	-		CA265_RS14750	0.19	+0.3
3,715,038	-		CA265_RS14750	0.24	-0.1
3,715,038	-		CA265_RS14750	0.24	-0.1
3,715,043	+		CA265_RS14750	0.25	+0.7
3,715,187	-		CA265_RS14750	0.42	-2.0
3,715,263	-		CA265_RS14750	0.51	-1.2
3,715,415	-		CA265_RS14750	0.69	-0.7