Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12740

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
3,173,748	-				+0.1
3,173,783	+				+0.8
3,173,784	-				+0.1
3,173,820	-				+0.3
3,173,932	+				+0.3
3,173,932	+				-0.1
3,173,937	+				-0.7
3,173,996	-		CA265_RS12735	0.11	+0.0
3,173,999	+		CA265_RS12735	0.12	+0.2
3,174,081	+		CA265_RS12735	0.28	-1.0
3,174,099	-		CA265_RS12735	0.32	+0.7
3,174,148	+		CA265_RS12735	0.41	+0.9
3,174,148	+		CA265_RS12735	0.41	+0.5
3,174,148	+		CA265_RS12735	0.41	+0.1
3,174,149	-		CA265_RS12735	0.41	-0.2
3,174,153	+		CA265_RS12735	0.42	-0.1
3,174,153	+		CA265_RS12735	0.42	-0.6
3,174,182	+		CA265_RS12735	0.48	+0.2
3,174,182	+		CA265_RS12735	0.48	-0.0
3,174,183	-		CA265_RS12735	0.48	-0.8
3,174,211	+		CA265_RS12735	0.54	-0.8
3,174,255	+		CA265_RS12735	0.62	+0.5
3,174,256	-		CA265_RS12735	0.63	-0.1
3,174,261	+		CA265_RS12735	0.64	+0.3
3,174,304	+		CA265_RS12735	0.72	+0.7
3,174,418	+				+0.6
3,174,634	-		CA265_RS12740	0.33	-1.5
3,174,811	+		CA265_RS12740	0.62	-2.0
3,174,813	+		CA265_RS12740	0.63	-0.8
3,174,911	-		CA265_RS12740	0.79	-2.3
3,174,918	-		CA265_RS12740	0.80	-1.6
3,174,954	-		CA265_RS12740	0.86	-1.4
3,174,978	-				+0.6
3,175,060	-				-0.4
3,175,071	+				+0.2
3,175,072	-				+0.3
3,175,072	-				-1.3
3,175,099	-				+0.2
3,175,119	+				-1.0
3,175,174	+				+0.3
3,175,175	-				+0.3
3,175,175	-				+0.3
3,175,175	-				+0.2
3,175,176	+				-0.3
3,175,177	-				+0.3
3,175,205	+				+0.4
3,175,205	+				-0.2
3,175,206	-				+0.1
3,175,206	-				+0.0
3,175,206	-				-0.5
3,175,226	+				+0.1
3,175,227	-				-0.4
3,175,356	-		CA265_RS12745	0.30	-0.0
3,175,407	-		CA265_RS12745	0.38	-0.7
3,175,517	+		CA265_RS12745	0.56	-0.3
3,175,525	+		CA265_RS12745	0.58	-0.6
3,175,526	-		CA265_RS12745	0.58	-0.5
3,175,568	+		CA265_RS12745	0.65	+0.6
3,175,575	-		CA265_RS12745	0.66	+0.0
3,175,575	-		CA265_RS12745	0.66	+0.3
3,175,575	-		CA265_RS12745	0.66	+0.0
3,175,629	-		CA265_RS12745	0.75	+0.7
3,175,762	+				+0.6
3,175,802	-				-0.3
3,175,831	+				-0.0
3,175,832	-				-0.9
3,175,875	+				-0.2
3,175,876	-				+1.8
3,175,876	-				-0.8
3,175,877	+				+0.4
3,175,879	+				+0.4
3,175,879	+				+0.3
3,175,901	-				+0.1
3,175,921	+				+0.9
3,175,922	-				-0.2
3,175,927	+				-0.6
3,175,931	-				-0.8
3,175,950	+				+0.8
3,175,958	+				-1.5
3,175,964	+				-1.0
3,175,968	+				+0.4
3,176,035	-				-0.7