Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11670

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,894,886	-				-1.7
2,894,928	+				-0.6
2,894,940	-				-0.4
2,894,969	+				-0.6
2,894,979	+				-0.5
2,894,979	+				+0.6
2,894,999	+				+0.0
2,895,024	-		CA265_RS11670	0.10	-1.3
2,895,035	+		CA265_RS11670	0.13	-0.2
2,895,035	+		CA265_RS11670	0.13	-4.2
2,895,035	+		CA265_RS11670	0.13	-0.9
2,895,048	+		CA265_RS11670	0.17	-0.3
2,895,121	+		CA265_RS11670	0.35	-1.2
2,895,134	-		CA265_RS11670	0.38	-1.5
2,895,163	-		CA265_RS11670	0.46	-0.4
2,895,192	+		CA265_RS11670	0.53	-4.2
2,895,193	-		CA265_RS11670	0.53	-0.7
2,895,193	-		CA265_RS11670	0.53	-0.7
2,895,198	-		CA265_RS11670	0.55	-1.4
2,895,201	+		CA265_RS11670	0.55	-0.4
2,895,205	+		CA265_RS11670	0.56	-1.5
2,895,244	-		CA265_RS11670	0.66	-0.8
2,895,244	-		CA265_RS11670	0.66	-0.8
2,895,259	-		CA265_RS11670	0.70	-0.9
2,895,279	+		CA265_RS11670	0.75	-1.4
2,895,327	+		CA265_RS11670	0.88	-0.2
2,895,392	-				+0.5
2,895,549	-				-0.2
2,895,565	+		CA265_RS11675	0.11	+0.0
2,895,586	+		CA265_RS11675	0.12	-0.3
2,895,626	+		CA265_RS11675	0.16	-0.9
2,895,676	-		CA265_RS11675	0.20	-0.7
2,895,680	+				-0.1
2,895,691	-		CA265_RS11675	0.21	-0.0
2,895,696	-		CA265_RS11675	0.21	-0.5
2,895,698	+		CA265_RS11675	0.22	-0.6
2,895,698	+		CA265_RS11675	0.22	-0.0
2,895,699	-		CA265_RS11675	0.22	-0.2
2,895,813	+		CA265_RS11675	0.31	+0.2
2,895,813	+		CA265_RS11675	0.31	-0.6
2,895,992	-		CA265_RS11675	0.46	-0.0
2,896,000	+		CA265_RS11675	0.47	-0.1
2,896,016	+		CA265_RS11675	0.48	-0.2
2,896,021	-		CA265_RS11675	0.49	+0.3
2,896,100	-		CA265_RS11675	0.55	-0.3
2,896,109	-		CA265_RS11675	0.56	+0.2
2,896,180	+		CA265_RS11675	0.62	-0.4
2,896,181	-		CA265_RS11675	0.62	+0.2
2,896,237	+		CA265_RS11675	0.67	-0.2
2,896,279	+		CA265_RS11675	0.70	-0.5
2,896,279	+		CA265_RS11675	0.70	+0.1
2,896,297	-		CA265_RS11675	0.72	-0.8
2,896,322	+		CA265_RS11675	0.74	-0.4
2,896,343	-		CA265_RS11675	0.75	-0.8