Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10540

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,609,763	-				+0.2
2,609,832	+				-0.4
2,609,892	+				-0.3
2,609,905	-				+0.0
2,609,905	-				-0.1
2,610,017	+				-0.1
2,610,017	+				+0.4
2,610,126	+		CA265_RS10540	0.35	-2.1
2,610,127	-		CA265_RS10540	0.36	-0.6
2,610,216	+				-0.0
2,610,228	+				+0.1
2,610,258	+				-0.2
2,610,266	+				+0.1
2,610,266	+				-0.1
2,610,268	+				-0.4
2,610,268	+				-0.7
2,610,296	-				-0.4
2,610,394	+				+0.4
2,610,395	-				+0.9
2,610,412	-				+0.5
2,610,436	-				-0.6
2,610,481	+				+0.1
2,610,589	-				-0.5
2,610,592	+				-0.0
2,610,656	+				-0.5
2,610,710	+				-0.9
2,610,787	+				-0.3
2,610,787	+				+0.3
2,610,817	+				+1.7
2,610,822	+				-0.6
2,610,847	+				-0.2
2,610,868	+				+0.6
2,610,877	-				+0.4
2,610,884	+				-0.2
2,610,885	-				+0.3
2,610,992	+				+1.1
2,610,992	+				-0.3
2,610,992	+				+0.3
2,610,992	+				-0.8
2,610,993	-				-0.2
2,611,025	+				-0.3
2,611,053	-				+0.5
2,611,072	-				+0.2
2,611,115	-				-0.3