Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10495

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,598,277	-		CA265_RS10490	0.33	+0.4
2,598,370	+		CA265_RS10490	0.49	-0.1
2,598,450	+		CA265_RS10490	0.63	-0.5
2,598,527	-		CA265_RS10490	0.76	+1.1
2,598,547	+		CA265_RS10490	0.80	-0.3
2,598,561	+		CA265_RS10490	0.82	+0.1
2,598,561	+		CA265_RS10490	0.82	+0.1
2,598,562	-		CA265_RS10490	0.82	+0.0
2,598,610	+				+0.4
2,598,634	-				-1.1
2,598,648	-				+0.5
2,598,662	+				-0.5
2,598,665	+				-0.2
2,598,665	+				-0.3
2,598,665	+				-0.7
2,598,665	+				+0.0
2,598,666	-				-0.6
2,598,690	-				+0.1
2,598,694	+				+0.1
2,598,698	+				-0.9
2,598,699	-				-0.3
2,598,718	-				+0.4
2,598,760	-				+0.3
2,598,775	-				+0.2
2,598,775	-				-0.9
2,598,939	+				+0.2
2,599,057	+				-0.2
2,599,082	-				-0.3
2,599,191	+				+0.7
2,599,221	+				+0.7
2,599,222	-				-0.0
2,599,294	+		CA265_RS10495	0.45	-0.8
2,599,304	+		CA265_RS10495	0.50	+0.1
2,599,305	-		CA265_RS10495	0.51	-1.4
2,599,397	+				-1.3
2,599,414	-				-0.2
2,599,477	-				-0.1
2,599,477	-				-0.3