Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09435

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,334,988	+		CA265_RS09430	0.26	-0.1
2,335,012	-		CA265_RS09430	0.28	+0.6
2,335,012	-		CA265_RS09430	0.28	-0.7
2,335,027	-		CA265_RS09430	0.29	-0.2
2,335,117	+		CA265_RS09430	0.37	-0.1
2,335,120	-		CA265_RS09430	0.38	-1.0
2,335,141	+		CA265_RS09430	0.39	+0.3
2,335,209	+		CA265_RS09430	0.45	-1.3
2,335,275	+		CA265_RS09430	0.51	-1.2
2,335,317	-		CA265_RS09430	0.55	-0.1
2,335,319	-		CA265_RS09430	0.55	+0.4
2,335,325	-		CA265_RS09430	0.55	-0.4
2,335,325	-		CA265_RS09430	0.55	-0.3
2,335,406	-		CA265_RS09430	0.63	-1.0
2,335,633	+		CA265_RS09430	0.82	-1.8
2,335,677	-		CA265_RS09430	0.86	-0.0
2,335,681	+		CA265_RS09430	0.87	-0.9
2,335,732	+				-0.6
2,335,840	-				+0.2
2,336,192	-		CA265_RS09435	0.24	-3.3
2,336,415	+		CA265_RS09435	0.44	-1.8
2,336,415	+		CA265_RS09435	0.44	-2.3
2,336,415	+		CA265_RS09435	0.44	-0.2
2,336,417	+		CA265_RS09435	0.44	+0.0
2,336,417	+		CA265_RS09435	0.44	-0.9
2,336,517	-		CA265_RS09435	0.54	-0.6
2,336,546	+		CA265_RS09435	0.56	-2.6
2,336,629	+		CA265_RS09435	0.64	+0.2
2,336,681	-		CA265_RS09435	0.69	-2.6
2,336,750	+		CA265_RS09435	0.75	-2.0
2,337,047	-				+0.1
2,337,097	-				+0.8
2,337,118	-				-0.6
2,337,128	-				+0.6