Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09270

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,308,805	+		CA265_RS09265	0.16	-0.0
2,308,806	-		CA265_RS09265	0.16	-0.3
2,308,830	+		CA265_RS09265	0.26	-0.3
2,308,922	+		CA265_RS09265	0.63	+1.0
2,308,944	+		CA265_RS09265	0.72	+0.1
2,308,996	+				-0.1
2,308,997	-				-1.8
2,309,050	-				+0.2
2,309,119	+				-0.2
2,309,120	-				-0.5
2,309,130	+				+0.0
2,309,136	+				+0.3
2,309,202	+				-0.3
2,309,203	-				-0.1
2,309,501	-				-0.3
2,309,503	-				-0.2
2,309,732	+				+0.3
2,309,796	-				+0.3
2,309,937	-		CA265_RS09270	0.58	-0.7
2,309,969	-		CA265_RS09270	0.71	-0.9
2,310,032	-				-0.1
2,310,074	+				-0.6
2,310,074	+				-0.2
2,310,097	+				+0.0
2,310,097	+				+0.2
2,310,133	+		CA265_RS09275	0.11	+0.4
2,310,133	+		CA265_RS09275	0.11	-0.1
2,310,133	+		CA265_RS09275	0.11	-0.6
2,310,160	+		CA265_RS09275	0.15	+0.2
2,310,160	+		CA265_RS09275	0.15	-0.5
2,310,190	-		CA265_RS09275	0.19	-1.1
2,310,196	-		CA265_RS09275	0.20	+0.1
2,310,281	-		CA265_RS09275	0.32	+0.5
2,310,296	-		CA265_RS09275	0.34	+0.0
2,310,398	-		CA265_RS09275	0.49	+0.5
2,310,398	-		CA265_RS09275	0.49	+0.2
2,310,464	+		CA265_RS09275	0.59	-0.2
2,310,465	-		CA265_RS09275	0.59	-0.6
2,310,499	+		CA265_RS09275	0.64	-0.1
2,310,562	+		CA265_RS09275	0.73	-0.6
2,310,643	+		CA265_RS09275	0.85	+0.0
2,310,705	-				-0.0
2,310,706	+				+0.3
2,310,710	-				+0.6
2,310,727	+				-0.2
2,310,795	+				-0.0
2,310,928	+		CA265_RS09280	0.10	+0.1
2,310,928	+		CA265_RS09280	0.10	-1.2
2,310,929	-		CA265_RS09280	0.10	-0.2
2,311,014	+		CA265_RS09280	0.28	-0.1
2,311,015	-		CA265_RS09280	0.28	-0.1
2,311,026	+		CA265_RS09280	0.30	+0.2
2,311,027	-		CA265_RS09280	0.31	-0.4