Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08955

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
2,232,945	+				+0.5
2,232,945	+				+0.6
2,234,060	-				+2.3
2,234,279	-		CA265_RS08955	0.19	-0.8
2,234,611	-		CA265_RS08955	0.37	-2.0
2,234,948	-		CA265_RS08955	0.56	-1.0
2,234,960	-		CA265_RS08955	0.57	-1.5
2,235,005	-		CA265_RS08955	0.59	-2.3
2,235,040	-		CA265_RS08955	0.61	-0.8
2,235,106	-		CA265_RS08955	0.65	-1.6
2,235,387	-		CA265_RS08955	0.81	+0.4
2,235,387	-		CA265_RS08955	0.81	-1.0
2,235,650	-				-0.6
2,235,695	-				-0.7
2,235,716	-				-0.6
2,235,854	-				-0.1
2,235,860	+				+0.1
2,235,882	+				+1.0
2,235,883	-				-1.1
2,235,931	-				+0.2
2,235,944	-				+1.0
2,235,982	-				+0.3
2,236,035	+				+0.1
2,236,094	+				+0.5
2,236,192	+				-0.0
2,236,280	+		CA265_RS08960	0.15	-0.1
2,236,442	-		CA265_RS08960	0.27	-0.8
2,236,479	+		CA265_RS08960	0.29	+0.1
2,236,480	-		CA265_RS08960	0.29	+0.7
2,236,546	-		CA265_RS08960	0.34	+0.1
2,236,551	-		CA265_RS08960	0.34	+0.1
2,236,643	+		CA265_RS08960	0.41	+0.1
2,236,644	-		CA265_RS08960	0.41	+0.3
2,236,656	+		CA265_RS08960	0.42	+0.1
2,236,656	+		CA265_RS08960	0.42	+0.1
2,236,688	+		CA265_RS08960	0.44	+0.2
2,236,689	-		CA265_RS08960	0.44	+1.0