Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06910

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
1,717,055	+		CA265_RS06905	0.27	-0.5
1,717,072	+		CA265_RS06905	0.29	-0.8
1,717,098	-		CA265_RS06905	0.31	-0.5
1,717,109	+		CA265_RS06905	0.32	+0.3
1,717,110	-		CA265_RS06905	0.32	-0.1
1,717,110	-		CA265_RS06905	0.32	+0.3
1,717,191	-		CA265_RS06905	0.39	-1.1
1,717,198	+		CA265_RS06905	0.39	-1.2
1,717,217	-		CA265_RS06905	0.41	+0.7
1,717,266	-		CA265_RS06905	0.45	+0.4
1,717,279	+		CA265_RS06905	0.46	+0.1
1,717,346	-		CA265_RS06905	0.51	-0.9
1,717,397	+		CA265_RS06905	0.56	-0.5
1,717,436	+		CA265_RS06905	0.59	-0.7
1,717,437	-		CA265_RS06905	0.59	+0.5
1,717,457	-		CA265_RS06905	0.61	-0.3
1,717,460	+		CA265_RS06905	0.61	-0.2
1,717,460	+		CA265_RS06905	0.61	-0.5
1,717,461	-		CA265_RS06905	0.61	-0.7
1,717,544	-		CA265_RS06905	0.68	+0.5
1,717,547	+		CA265_RS06905	0.68	-0.2
1,717,548	-		CA265_RS06905	0.68	-0.3
1,717,548	-		CA265_RS06905	0.68	+0.0
1,717,548	-		CA265_RS06905	0.68	-0.3
1,717,548	-		CA265_RS06905	0.68	-0.5
1,717,678	+		CA265_RS06905	0.79	-0.4
1,717,679	-		CA265_RS06905	0.79	+0.0
1,717,696	-		CA265_RS06905	0.80	-1.9
1,717,712	+		CA265_RS06905	0.82	-0.9
1,717,859	+				+0.1
1,717,860	-				+0.1
1,717,962	+				+0.1
1,718,036	+				-0.6
1,718,049	+				+0.6
1,718,101	+		CA265_RS06910	0.36	-0.5
1,718,113	+		CA265_RS06910	0.42	-1.2
1,718,114	-		CA265_RS06910	0.43	-1.1
1,718,382	+				-0.8
1,718,468	+				+0.2
1,718,470	+				+0.3
1,718,488	+				-0.1
1,718,544	-		CA265_RS06915	0.12	+1.1
1,718,544	-		CA265_RS06915	0.12	-0.0
1,718,544	-		CA265_RS06915	0.12	-0.3
1,718,592	+		CA265_RS06915	0.14	-0.1
1,718,713	+		CA265_RS06915	0.18	+1.1
1,718,713	+		CA265_RS06915	0.18	-0.5
1,718,724	-		CA265_RS06915	0.19	-0.4
1,718,724	-		CA265_RS06915	0.19	+0.1
1,718,733	+		CA265_RS06915	0.19	+0.5
1,718,733	+		CA265_RS06915	0.19	-0.0
1,718,755	+		CA265_RS06915	0.20	-1.7
1,718,756	-		CA265_RS06915	0.20	+0.8
1,718,911	-		CA265_RS06915	0.25	-0.6
1,718,965	-		CA265_RS06915	0.27	+0.2
1,719,097	+		CA265_RS06915	0.32	-0.5