Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06200

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
1,528,211	+				+0.2
1,528,212	-				+0.5
1,528,850	-				+0.4
1,528,920	+				-0.5
1,528,930	+				+0.5
1,528,930	+				-0.9
1,529,021	+				-0.5
1,529,022	-				-1.3
1,529,067	-				-2.1
1,529,119	+				-0.1
1,529,130	+		CA265_RS06200	0.10	-1.3
1,529,265	-		CA265_RS06200	0.20	-0.9
1,529,312	+		CA265_RS06200	0.24	+1.1
1,529,317	+		CA265_RS06200	0.24	-0.9
1,529,318	-		CA265_RS06200	0.24	+1.4
1,529,378	+		CA265_RS06200	0.29	-0.6
1,529,378	+				-1.5
1,529,385	+		CA265_RS06200	0.29	-0.1
1,529,425	-		CA265_RS06200	0.32	-1.4
1,529,456	-		CA265_RS06200	0.35	-1.4
1,529,464	-		CA265_RS06200	0.35	-0.9
1,529,464	-		CA265_RS06200	0.35	-2.1
1,529,660	+		CA265_RS06200	0.50	-1.2
1,529,683	-		CA265_RS06200	0.52	-1.2
1,529,865	-		CA265_RS06200	0.66	-1.4
1,529,888	+		CA265_RS06200	0.67	-1.3
1,529,895	-		CA265_RS06200	0.68	-0.4
1,529,941	+		CA265_RS06200	0.71	-0.0
1,529,942	-		CA265_RS06200	0.72	+1.7
1,529,942	-		CA265_RS06200	0.72	-0.3
1,529,981	+		CA265_RS06200	0.74	-0.6
1,529,985	+		CA265_RS06200	0.75	-1.0
1,530,006	-		CA265_RS06200	0.76	-1.6
1,530,064	-		CA265_RS06200	0.81	-1.4
1,530,087	+		CA265_RS06200	0.82	+0.9
1,530,211	+				-0.7
1,530,285	-				-1.1
1,530,357	-				-0.1
1,530,407	+				+0.3
1,530,422	-				+0.5
1,530,445	+				-0.1
1,530,446	-				-0.6
1,530,478	-				+0.5
1,530,478	-				+0.3
1,530,490	-				-0.8