Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06175

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
1,523,330	-		CA265_RS06165	0.83	+0.9
1,523,397	+				-0.2
1,523,430	-				+0.5
1,523,431	+				-0.2
1,523,462	+				-0.3
1,523,472	+				+0.1
1,523,473	-				-0.3
1,523,503	-				-0.2
1,523,582	+				-0.1
1,523,602	+				-0.2
1,523,612	+				-1.7
1,523,802	-		CA265_RS06170	0.17	+0.3
1,523,817	+		CA265_RS06170	0.22	-0.0
1,523,892	+		CA265_RS06170	0.45	+1.0
1,523,892	+		CA265_RS06170	0.45	+0.2
1,523,892	+		CA265_RS06170	0.45	-0.3
1,523,893	-		CA265_RS06170	0.46	-0.1
1,523,912	-		CA265_RS06170	0.52	+0.1
1,524,035	-				-0.3
1,524,042	+				-1.5
1,524,063	+				+0.1
1,524,184	+				-0.2
1,524,184	+				-0.2
1,524,185	-				-0.8
1,524,212	+				+0.3
1,524,257	-				-0.7
1,524,465	-		CA265_RS06175	0.77	-0.7
1,524,524	+				+0.1
1,524,525	-				+0.7
1,524,525	-				+0.1
1,524,662	+				+0.2
1,524,662	+				-0.5
1,524,805	+				-0.6
1,524,815	+				+0.2
1,524,914	-				+1.1
1,524,932	+		CA265_RS06180	0.58	-0.6
1,524,943	+		CA265_RS06180	0.63	-1.1
1,524,977	-		CA265_RS06180	0.79	+0.3
1,524,986	+		CA265_RS06180	0.83	-0.0
1,524,992	+		CA265_RS06180	0.86	-1.5
1,525,041	-				+0.4
1,525,064	+				-0.4
1,525,066	+				+0.3
1,525,159	-				-0.4
1,525,205	+				-0.3
1,525,284	-		CA265_RS06185	0.13	-0.3
1,525,432	+		CA265_RS06185	0.21	+0.3
1,525,456	+		CA265_RS06185	0.22	+0.2
1,525,457	-		CA265_RS06185	0.22	+0.6
1,525,457	-		CA265_RS06185	0.22	+0.5