Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_895 and Ac3H11_896 are separated by 255 nucleotides Ac3H11_896 and Ac3H11_897 are separated by 93 nucleotides
Ac3H11_895 - HDIG domain protein, at 1,495 to 2,238
_895
Ac3H11_896 - macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif., at 2,494 to 6,606
_896
Ac3H11_897 - Beta-lactamase (EC 3.5.2.6), at 6,700 to 8,571
_897
Position (kb)
2
3
4
5
6
7 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1.651 kb on - strand, within Ac3H11_895 at 1.697 kb on - strand, within Ac3H11_895 at 1.733 kb on + strand, within Ac3H11_895 at 1.733 kb on + strand, within Ac3H11_895 at 1.734 kb on - strand, within Ac3H11_895 at 1.734 kb on - strand, within Ac3H11_895 at 1.734 kb on - strand, within Ac3H11_895 at 1.849 kb on + strand, within Ac3H11_895 at 1.850 kb on - strand, within Ac3H11_895 at 1.876 kb on + strand, within Ac3H11_895 at 2.067 kb on + strand, within Ac3H11_895 at 2.068 kb on - strand, within Ac3H11_895 at 2.068 kb on - strand, within Ac3H11_895 at 2.068 kb on - strand, within Ac3H11_895 at 2.068 kb on - strand, within Ac3H11_895 at 2.236 kb on + strand at 2.323 kb on + strand at 2.323 kb on + strand at 2.323 kb on + strand at 2.324 kb on - strand at 2.324 kb on - strand at 2.324 kb on - strand at 2.324 kb on - strand at 2.326 kb on + strand at 2.326 kb on + strand at 2.326 kb on + strand at 2.326 kb on + strand at 2.327 kb on - strand at 2.327 kb on - strand at 2.327 kb on - strand at 2.327 kb on - strand at 2.327 kb on - strand at 2.327 kb on - strand at 2.358 kb on + strand at 2.414 kb on + strand at 2.415 kb on - strand at 2.455 kb on + strand at 2.456 kb on - strand at 2.499 kb on + strand at 2.499 kb on + strand at 2.499 kb on + strand at 2.499 kb on + strand at 2.500 kb on - strand at 2.660 kb on + strand at 2.756 kb on + strand at 2.898 kb on - strand at 2.990 kb on + strand, within Ac3H11_896 at 3.086 kb on + strand, within Ac3H11_896 at 3.086 kb on + strand, within Ac3H11_896 at 3.087 kb on - strand, within Ac3H11_896 at 3.087 kb on - strand, within Ac3H11_896 at 3.087 kb on - strand, within Ac3H11_896 at 3.087 kb on - strand, within Ac3H11_896 at 3.131 kb on + strand, within Ac3H11_896 at 3.131 kb on + strand, within Ac3H11_896 at 3.132 kb on - strand, within Ac3H11_896 at 3.132 kb on - strand, within Ac3H11_896 at 3.132 kb on - strand, within Ac3H11_896 at 3.331 kb on - strand, within Ac3H11_896 at 3.956 kb on + strand, within Ac3H11_896 at 3.956 kb on + strand, within Ac3H11_896 at 3.957 kb on - strand, within Ac3H11_896 at 3.957 kb on - strand, within Ac3H11_896 at 3.957 kb on - strand, within Ac3H11_896 at 4.095 kb on - strand, within Ac3H11_896 at 4.095 kb on - strand, within Ac3H11_896 at 4.148 kb on + strand, within Ac3H11_896 at 4.148 kb on + strand, within Ac3H11_896 at 4.157 kb on + strand, within Ac3H11_896 at 4.158 kb on - strand, within Ac3H11_896 at 4.324 kb on + strand, within Ac3H11_896 at 4.355 kb on + strand, within Ac3H11_896 at 4.370 kb on + strand, within Ac3H11_896 at 4.371 kb on - strand, within Ac3H11_896 at 4.371 kb on - strand, within Ac3H11_896 at 4.587 kb on - strand, within Ac3H11_896 at 4.613 kb on + strand, within Ac3H11_896 at 4.614 kb on - strand, within Ac3H11_896 at 4.688 kb on + strand, within Ac3H11_896 at 4.688 kb on + strand, within Ac3H11_896 at 4.689 kb on - strand, within Ac3H11_896 at 4.815 kb on - strand, within Ac3H11_896 at 4.840 kb on - strand, within Ac3H11_896 at 5.021 kb on + strand, within Ac3H11_896 at 5.409 kb on + strand, within Ac3H11_896 at 5.444 kb on + strand, within Ac3H11_896 at 5.444 kb on + strand, within Ac3H11_896 at 5.445 kb on - strand, within Ac3H11_896 at 5.595 kb on - strand, within Ac3H11_896 at 6.065 kb on + strand, within Ac3H11_896 at 6.065 kb on + strand, within Ac3H11_896 at 6.065 kb on + strand, within Ac3H11_896 at 6.128 kb on + strand, within Ac3H11_896 at 6.634 kb on + strand at 6.634 kb on + strand at 6.634 kb on + strand at 6.634 kb on + strand at 6.635 kb on - strand at 6.635 kb on - strand at 6.749 kb on + strand at 6.887 kb on + strand at 6.888 kb on - strand, within Ac3H11_897 at 7.259 kb on + strand, within Ac3H11_897 at 7.259 kb on + strand at 7.259 kb on + strand, within Ac3H11_897 at 7.260 kb on - strand, within Ac3H11_897 at 7.260 kb on - strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.316 kb on - strand, within Ac3H11_897 at 7.316 kb on - strand, within Ac3H11_897 at 7.375 kb on + strand, within Ac3H11_897 at 7.474 kb on + strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,651 - Ac3H11_895 0.21 -2.1 1,697 - Ac3H11_895 0.27 -0.1 1,733 + Ac3H11_895 0.32 -1.8 1,733 + Ac3H11_895 0.32 -0.7 1,734 - Ac3H11_895 0.32 -0.1 1,734 - Ac3H11_895 0.32 +1.1 1,734 - Ac3H11_895 0.32 -3.3 1,849 + Ac3H11_895 0.48 -0.2 1,850 - Ac3H11_895 0.48 -0.1 1,876 + Ac3H11_895 0.51 +0.1 2,067 + Ac3H11_895 0.77 -0.2 2,068 - Ac3H11_895 0.77 +0.1 2,068 - Ac3H11_895 0.77 -0.7 2,068 - Ac3H11_895 0.77 +1.3 2,068 - Ac3H11_895 0.77 +1.2 2,236 + -0.4 2,323 + +0.7 2,323 + +0.6 2,323 + +1.6 2,324 - +0.2 2,324 - -1.8 2,324 - +0.4 2,324 - -2.5 2,326 + +0.1 2,326 + +0.2 2,326 + +0.6 2,326 + +0.4 2,327 - -0.2 2,327 - -0.9 2,327 - -1.2 2,327 - -1.4 2,327 - +0.4 2,327 - +1.2 2,358 + -0.7 2,414 + +0.9 2,415 - -0.6 2,455 + -1.1 2,456 - +0.6 2,499 + +1.8 2,499 + +0.9 2,499 + +0.1 2,499 + +1.0 2,500 - +0.0 2,660 + +0.3 2,756 + -3.3 2,898 - -1.1 2,990 + Ac3H11_896 0.12 -1.5 3,086 + Ac3H11_896 0.14 -0.5 3,086 + Ac3H11_896 0.14 +1.3 3,087 - Ac3H11_896 0.14 +0.5 3,087 - Ac3H11_896 0.14 -2.8 3,087 - Ac3H11_896 0.14 +0.4 3,087 - Ac3H11_896 0.14 +1.1 3,131 + Ac3H11_896 0.15 -1.3 3,131 + Ac3H11_896 0.15 -1.4 3,132 - Ac3H11_896 0.16 +0.8 3,132 - Ac3H11_896 0.16 -0.5 3,132 - Ac3H11_896 0.16 +0.7 3,331 - Ac3H11_896 0.20 -2.1 3,956 + Ac3H11_896 0.36 -0.3 3,956 + Ac3H11_896 0.36 -3.4 3,957 - Ac3H11_896 0.36 +0.3 3,957 - Ac3H11_896 0.36 +0.9 3,957 - Ac3H11_896 0.36 -1.5 4,095 - Ac3H11_896 0.39 +0.3 4,095 - Ac3H11_896 0.39 +0.9 4,148 + Ac3H11_896 0.40 -1.6 4,148 + Ac3H11_896 0.40 -0.1 4,157 + Ac3H11_896 0.40 -0.6 4,158 - Ac3H11_896 0.40 -3.0 4,324 + Ac3H11_896 0.44 -0.3 4,355 + Ac3H11_896 0.45 +0.0 4,370 + Ac3H11_896 0.46 +1.0 4,371 - Ac3H11_896 0.46 +0.8 4,371 - Ac3H11_896 0.46 +0.3 4,587 - Ac3H11_896 0.51 +1.1 4,613 + Ac3H11_896 0.52 -2.5 4,614 - Ac3H11_896 0.52 +0.7 4,688 + Ac3H11_896 0.53 -1.5 4,688 + Ac3H11_896 0.53 -1.3 4,689 - Ac3H11_896 0.53 -0.8 4,815 - Ac3H11_896 0.56 +0.6 4,840 - Ac3H11_896 0.57 -1.5 5,021 + Ac3H11_896 0.61 -1.0 5,409 + Ac3H11_896 0.71 +1.8 5,444 + Ac3H11_896 0.72 -2.9 5,444 + Ac3H11_896 0.72 -2.9 5,445 - Ac3H11_896 0.72 -0.9 5,595 - Ac3H11_896 0.75 -2.0 6,065 + Ac3H11_896 0.87 +0.1 6,065 + Ac3H11_896 0.87 -2.0 6,065 + Ac3H11_896 0.87 +0.7 6,128 + Ac3H11_896 0.88 -1.0 6,634 + +0.4 6,634 + +1.3 6,634 + -0.1 6,634 + +0.7 6,635 - -0.4 6,635 - -0.2 6,749 + -0.5 6,887 + -0.5 6,888 - Ac3H11_897 0.10 -2.9 7,259 + Ac3H11_897 0.30 -0.9 7,259 + +0.3 7,259 + Ac3H11_897 0.30 +1.3 7,260 - Ac3H11_897 0.30 +1.2 7,260 - Ac3H11_897 0.30 -0.1 7,315 + Ac3H11_897 0.33 -0.4 7,315 + Ac3H11_897 0.33 -0.3 7,315 + Ac3H11_897 0.33 +0.7 7,316 - Ac3H11_897 0.33 +0.3 7,316 - Ac3H11_897 0.33 -0.7 7,375 + Ac3H11_897 0.36 +1.0 7,474 + Ac3H11_897 0.41 +1.6 7,475 - Ac3H11_897 0.41 -0.2 7,475 - Ac3H11_897 0.41 +0.5 7,475 - Ac3H11_897 0.41 +0.5
Or see this region's nucleotide sequence