Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_664 and Ac3H11_665 are separated by 202 nucleotides Ac3H11_665 and Ac3H11_666 are separated by 185 nucleotides
Ac3H11_664 - 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9), at 21,379 to 22,134
_664
Ac3H11_665 - Magnesium and cobalt transport protein CorA, at 22,337 to 23,323
_665
Ac3H11_666 - Bacteriophage-related DNA polymerase, at 23,509 to 24,279
_666
Position (kb)
22
23
24 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 21.378 kb on + strand at 21.379 kb on - strand at 21.379 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.718 kb on + strand, within Ac3H11_664 at 21.719 kb on - strand, within Ac3H11_664 at 21.995 kb on - strand, within Ac3H11_664 at 22.211 kb on + strand at 22.211 kb on + strand at 22.212 kb on - strand at 22.212 kb on - strand at 22.212 kb on - strand at 22.224 kb on - strand at 22.224 kb on - strand at 22.338 kb on + strand at 22.338 kb on + strand at 22.338 kb on + strand at 22.339 kb on - strand at 22.339 kb on - strand at 22.339 kb on - strand at 23.410 kb on - strand at 23.410 kb on - strand at 23.422 kb on - strand at 23.469 kb on - strand at 24.280 kb on - strand at 24.280 kb on - strand at 24.280 kb on - strand at 24.280 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 21,378 + -2.7 21,379 - -0.1 21,379 - +1.5 21,385 - -0.6 21,385 - -2.4 21,385 - -1.2 21,385 - +0.2 21,661 + Ac3H11_664 0.37 +0.3 21,661 + Ac3H11_664 0.37 +0.1 21,661 + Ac3H11_664 0.37 -1.6 21,661 + Ac3H11_664 0.37 +0.6 21,661 + Ac3H11_664 0.37 +1.4 21,662 - Ac3H11_664 0.37 -0.4 21,662 - Ac3H11_664 0.37 +0.4 21,662 - Ac3H11_664 0.37 +0.8 21,662 - Ac3H11_664 0.37 -0.2 21,662 - Ac3H11_664 0.37 +0.7 21,662 - Ac3H11_664 0.37 +0.6 21,718 + Ac3H11_664 0.45 +1.1 21,719 - Ac3H11_664 0.45 +0.4 21,995 - Ac3H11_664 0.81 +0.7 22,211 + -3.1 22,211 + +0.7 22,212 - +1.8 22,212 - +1.7 22,212 - -0.2 22,224 - +0.1 22,224 - -0.6 22,338 + -0.0 22,338 + +1.4 22,338 + +0.8 22,339 - +0.1 22,339 - +0.8 22,339 - +0.3 23,410 - +0.2 23,410 - -0.1 23,422 - +2.4 23,469 - +1.6 24,280 - -1.6 24,280 - -0.2 24,280 - -1.7 24,280 - -1.1
Or see this region's nucleotide sequence