Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_377 and Ac3H11_565 are separated by 48 nucleotides
Ac3H11_377 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 52,425 to 54,353
_377
Ac3H11_565 - tRNA-His-GTG, at 54,402 to 54,474
_565
Position (kb) 54
55 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 54.710 kb on + strand at 54.754 kb on + strand at 54.755 kb on - strand at 54.766 kb on + strand at 54.767 kb on - strand at 54.767 kb on - strand at 54.791 kb on - strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.936 kb on - strand at 54.936 kb on - strand at 54.936 kb on - strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.104 kb on + strand at 55.145 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.215 kb on + strand at 55.216 kb on - strand at 55.305 kb on + strand at 55.306 kb on - strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.378 kb on + strand at 55.379 kb on - strand at 55.379 kb on - strand at 55.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 54,710 + -0.0 54,754 + +0.0 54,755 - +0.3 54,766 + -1.0 54,767 - -1.8 54,767 - -2.5 54,791 - +1.6 54,795 + -1.5 54,795 + -2.9 54,795 + -0.7 54,795 + -2.9 54,796 - +1.2 54,796 - +0.2 54,796 - +1.8 54,796 - -0.5 54,796 - -0.1 54,796 - -0.7 54,796 - -0.1 54,929 + +0.0 54,929 + -2.8 54,929 + +3.9 54,929 + +0.2 54,929 + -0.2 54,929 + +2.2 54,929 + +2.0 54,929 + +0.5 54,929 + -0.2 54,930 - -0.4 54,930 - -0.3 54,930 - -0.4 54,930 - -0.5 54,930 - -0.1 54,935 + +1.7 54,935 + -0.2 54,935 + +0.7 54,935 + -2.0 54,936 - +0.8 54,936 - +1.2 54,936 - +0.7 55,102 + -1.9 55,102 + +2.9 55,102 + -2.7 55,102 + -0.9 55,102 + +0.8 55,102 + +0.9 55,103 - -0.5 55,103 - -1.5 55,103 - +2.2 55,103 - -0.0 55,103 - -0.7 55,103 - +1.3 55,103 - +0.2 55,103 - -0.5 55,103 - +1.2 55,104 + -0.4 55,145 + +0.1 55,213 + -1.0 55,213 + -0.8 55,213 + -2.1 55,213 + -0.4 55,213 + -0.5 55,213 + -2.8 55,214 - -1.1 55,214 - +2.8 55,214 - -0.9 55,214 - -1.3 55,214 - -0.5 55,214 - +1.2 55,215 + +0.8 55,216 - -1.2 55,305 + -0.1 55,306 - -3.9 55,364 + +1.1 55,364 + -2.0 55,364 + +2.2 55,364 + +0.6 55,364 + +0.4 55,365 - +0.2 55,365 - -1.3 55,365 - +1.1 55,365 - -0.2 55,378 + -0.0 55,379 - +0.3 55,379 - -1.1 55,379 - -0.9
Or see this region's nucleotide sequence