Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4897 and Ac3H11_4898 are separated by 176 nucleotides Ac3H11_4898 and Ac3H11_4899 are separated by 140 nucleotides Ac3H11_4899 and Ac3H11_4900 overlap by 17 nucleotides
Ac3H11_4897 - ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), at 63,794 to 64,429
_4897
Ac3H11_4898 - Calcium-binding EF-hand-containing protein, at 64,606 to 64,935
_4898
Ac3H11_4899 - ABC transporter ATP-binding protein, at 65,076 to 65,870
_4899
Ac3H11_4900 - Putative amino acid ABC transporter, permease protein, at 65,854 to 66,507
_4900
Position (kb) 64
65 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 63.639 kb on + strand at 63.646 kb on + strand at 63.646 kb on + strand at 63.787 kb on + strand at 63.787 kb on + strand at 63.791 kb on + strand at 63.791 kb on + strand at 63.791 kb on + strand at 63.912 kb on + strand, within Ac3H11_4897 at 63.912 kb on + strand, within Ac3H11_4897 at 63.913 kb on - strand, within Ac3H11_4897 at 64.386 kb on - strand at 64.386 kb on - strand at 64.493 kb on + strand at 64.493 kb on + strand at 64.493 kb on + strand at 64.493 kb on + strand at 64.494 kb on - strand at 64.494 kb on - strand at 64.631 kb on - strand at 64.631 kb on - strand at 64.631 kb on - strand at 64.735 kb on + strand, within Ac3H11_4898 at 64.735 kb on + strand, within Ac3H11_4898 at 64.735 kb on + strand, within Ac3H11_4898 at 64.736 kb on - strand, within Ac3H11_4898 at 64.736 kb on - strand, within Ac3H11_4898 at 64.741 kb on + strand, within Ac3H11_4898 at 64.997 kb on + strand at 64.997 kb on + strand at 64.998 kb on - strand at 65.364 kb on - strand, within Ac3H11_4899 at 65.774 kb on - strand, within Ac3H11_4899 at 65.774 kb on - strand, within Ac3H11_4899 at 65.774 kb on - strand, within Ac3H11_4899 at 65.774 kb on - strand, within Ac3H11_4899 at 65.853 kb on - strand at 65.853 kb on - strand at 65.927 kb on + strand, within Ac3H11_4900 at 65.927 kb on + strand, within Ac3H11_4900
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 63,639 + +1.0 63,646 + +0.3 63,646 + -1.0 63,787 + -3.7 63,787 + +0.8 63,791 + +0.3 63,791 + -0.2 63,791 + -0.4 63,912 + Ac3H11_4897 0.19 +0.5 63,912 + Ac3H11_4897 0.19 +1.1 63,913 - Ac3H11_4897 0.19 -0.7 64,386 - -0.1 64,386 - -1.0 64,493 + +0.8 64,493 + +1.1 64,493 + -0.8 64,493 + -1.1 64,494 - +0.2 64,494 - -0.3 64,631 - +0.6 64,631 - +0.5 64,631 - +0.3 64,735 + Ac3H11_4898 0.39 +0.6 64,735 + Ac3H11_4898 0.39 -0.6 64,735 + Ac3H11_4898 0.39 +0.7 64,736 - Ac3H11_4898 0.39 +0.9 64,736 - Ac3H11_4898 0.39 -1.4 64,741 + Ac3H11_4898 0.41 +0.0 64,997 + -1.6 64,997 + +0.3 64,998 - +1.1 65,364 - Ac3H11_4899 0.36 +0.4 65,774 - Ac3H11_4899 0.88 -0.7 65,774 - Ac3H11_4899 0.88 -0.4 65,774 - Ac3H11_4899 0.88 -2.6 65,774 - Ac3H11_4899 0.88 -0.1 65,853 - -0.8 65,853 - +0.3 65,927 + Ac3H11_4900 0.11 -1.4 65,927 + Ac3H11_4900 0.11 -3.0
Or see this region's nucleotide sequence