Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4772

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4771 and Ac3H11_4772 are separated by 90 nucleotidesAc3H11_4772 and Ac3H11_4773 are separated by 92 nucleotides Ac3H11_4771 - Glutamate 5-kinase (EC 2.7.2.11), at 71,445 to 72,599 _4771 Ac3H11_4772 - Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-), at 72,690 to 73,367 _4772 Ac3H11_4773 - Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type, at 73,460 to 75,202 _4773 Position (kb) 72 73 74Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.474 kb on + strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.475 kb on - strand, within Ac3H11_4771at 72.614 kb on + strandat 72.614 kb on + strandat 72.614 kb on + strandat 72.615 kb on - strandat 72.615 kb on - strandat 72.615 kb on - strandat 72.615 kb on - strandat 72.642 kb on + strandat 72.643 kb on - strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.657 kb on + strandat 72.658 kb on - strandat 72.658 kb on - strandat 72.658 kb on - strandat 72.658 kb on - strandat 72.658 kb on - strandat 72.658 kb on - strandat 72.823 kb on + strand, within Ac3H11_4772at 72.823 kb on + strand, within Ac3H11_4772at 72.823 kb on + strand, within Ac3H11_4772at 72.823 kb on + strand, within Ac3H11_4772at 72.823 kb on + strand, within Ac3H11_4772at 72.823 kb on + strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.824 kb on - strand, within Ac3H11_4772at 72.877 kb on + strand, within Ac3H11_4772at 72.877 kb on + strand, within Ac3H11_4772at 72.877 kb on + strand, within Ac3H11_4772at 72.877 kb on + strand, within Ac3H11_4772at 72.877 kb on + strand, within Ac3H11_4772at 72.878 kb on - strand, within Ac3H11_4772at 72.878 kb on - strand, within Ac3H11_4772at 72.878 kb on - strand, within Ac3H11_4772at 72.878 kb on - strand, within Ac3H11_4772at 72.878 kb on - strand, within Ac3H11_4772at 72.908 kb on - strand, within Ac3H11_4772at 72.937 kb on + strand, within Ac3H11_4772at 72.938 kb on - strand, within Ac3H11_4772at 72.938 kb on - strand, within Ac3H11_4772at 72.982 kb on + strand, within Ac3H11_4772at 72.982 kb on + strand, within Ac3H11_4772at 73.093 kb on + strand, within Ac3H11_4772at 73.094 kb on - strand, within Ac3H11_4772at 73.094 kb on - strand, within Ac3H11_4772at 73.120 kb on + strand, within Ac3H11_4772at 73.120 kb on + strand, within Ac3H11_4772at 73.367 kb on + strandat 73.400 kb on + strandat 73.400 kb on + strandat 73.400 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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72,474 + Ac3H11_4771 0.89 +0.6
72,474 + Ac3H11_4771 0.89 +0.3
72,474 + Ac3H11_4771 0.89 +1.6
72,474 + Ac3H11_4771 0.89 +1.0
72,474 + Ac3H11_4771 0.89 -1.0
72,474 + Ac3H11_4771 0.89 +0.3
72,474 + Ac3H11_4771 0.89 -0.3
72,474 + Ac3H11_4771 0.89 +0.5
72,474 + Ac3H11_4771 0.89 -0.2
72,474 + Ac3H11_4771 0.89 -0.4
72,474 + Ac3H11_4771 0.89 +0.3
72,474 + Ac3H11_4771 0.89 +0.9
72,474 + Ac3H11_4771 0.89 -2.5
72,475 - Ac3H11_4771 0.89 -1.6
72,475 - Ac3H11_4771 0.89 -0.2
72,475 - Ac3H11_4771 0.89 +0.1
72,475 - Ac3H11_4771 0.89 +0.1
72,475 - Ac3H11_4771 0.89 +0.3
72,475 - Ac3H11_4771 0.89 -4.0
72,475 - Ac3H11_4771 0.89 -1.2
72,475 - Ac3H11_4771 0.89 -1.2
72,475 - Ac3H11_4771 0.89 +0.2
72,475 - Ac3H11_4771 0.89 -0.7
72,614 + +1.4
72,614 + -0.5
72,614 + -1.7
72,615 - +0.8
72,615 - -1.7
72,615 - -0.6
72,615 - +0.9
72,642 + +0.1
72,643 - +0.7
72,657 + -0.1
72,657 + +1.2
72,657 + +0.8
72,657 + +0.9
72,657 + -1.8
72,657 + +0.6
72,657 + +0.3
72,657 + +0.3
72,657 + +0.3
72,657 + +0.9
72,657 + +1.9
72,658 - -0.6
72,658 - +0.8
72,658 - -0.5
72,658 - +0.3
72,658 - +0.8
72,658 - +0.2
72,823 + Ac3H11_4772 0.20 -1.8
72,823 + Ac3H11_4772 0.20 +2.3
72,823 + Ac3H11_4772 0.20 +2.5
72,823 + Ac3H11_4772 0.20 +0.8
72,823 + Ac3H11_4772 0.20 +1.7
72,823 + Ac3H11_4772 0.20 +2.9
72,824 - Ac3H11_4772 0.20 +0.8
72,824 - Ac3H11_4772 0.20 -0.5
72,824 - Ac3H11_4772 0.20 +1.1
72,824 - Ac3H11_4772 0.20 +1.5
72,824 - Ac3H11_4772 0.20 -0.1
72,824 - Ac3H11_4772 0.20 -1.7
72,824 - Ac3H11_4772 0.20 +1.4
72,824 - Ac3H11_4772 0.20 +0.0
72,824 - Ac3H11_4772 0.20 +1.3
72,824 - Ac3H11_4772 0.20 +2.0
72,824 - Ac3H11_4772 0.20 -0.2
72,824 - Ac3H11_4772 0.20 +1.2
72,877 + Ac3H11_4772 0.28 +2.4
72,877 + Ac3H11_4772 0.28 +0.4
72,877 + Ac3H11_4772 0.28 +1.4
72,877 + Ac3H11_4772 0.28 +2.1
72,877 + Ac3H11_4772 0.28 +1.6
72,878 - Ac3H11_4772 0.28 +2.2
72,878 - Ac3H11_4772 0.28 +2.2
72,878 - Ac3H11_4772 0.28 +1.3
72,878 - Ac3H11_4772 0.28 +1.6
72,878 - Ac3H11_4772 0.28 +2.2
72,908 - Ac3H11_4772 0.32 +2.0
72,937 + Ac3H11_4772 0.36 +1.7
72,938 - Ac3H11_4772 0.37 +1.4
72,938 - Ac3H11_4772 0.37 +1.8
72,982 + Ac3H11_4772 0.43 +2.6
72,982 + Ac3H11_4772 0.43 +1.5
73,093 + Ac3H11_4772 0.59 +1.1
73,094 - Ac3H11_4772 0.60 +2.1
73,094 - Ac3H11_4772 0.60 +0.1
73,120 + Ac3H11_4772 0.63 -1.2
73,120 + Ac3H11_4772 0.63 +0.0
73,367 + +2.7
73,400 + +2.2
73,400 + +1.2
73,400 + -0.2

Or see this region's nucleotide sequence